Gene : Thecc1EG041898 T. cacao v1.1
Defline:  (1 of 19) PF16135 - TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  3217
Name:  ? Thecc1EG041898 Secondary Identifier:  ? PAC:27426157
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041898 0.5kb upstream 0.5kb upstream 3851 true scaffold_9: 40009038-40012888 Theobroma cacao
Thecc1EG041898 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 40012389-40012888 Theobroma cacao
Thecc1EG041898 0.5kb downstream 0.5kb downstream 3851 true scaffold_9: 40008538-40012388 Theobroma cacao
Thecc1EG041898 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 40008538-40009037 Theobroma cacao
Thecc1EG041898 1.0kb upstream 1.0kb upstream 4351 true scaffold_9: 40009038-40013388 Theobroma cacao
Thecc1EG041898 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 40012389-40013388 Theobroma cacao
Thecc1EG041898 1.0kb downstream 1.0kb downstream 4351 true scaffold_9: 40008038-40012388 Theobroma cacao
Thecc1EG041898 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40008038-40009037 Theobroma cacao
Thecc1EG041898 2.0kb upstream 2.0kb upstream 5351 true scaffold_9: 40009038-40014388 Theobroma cacao
Thecc1EG041898 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 40012389-40014388 Theobroma cacao
Thecc1EG041898 2.0kb downstream 2.0kb downstream 5351 true scaffold_9: 40007038-40012388 Theobroma cacao
Thecc1EG041898 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40007038-40009037 Theobroma cacao
Thecc1EG041898 5.0kb upstream 5.0kb upstream 8351 true scaffold_9: 40009038-40017388 Theobroma cacao
Thecc1EG041898 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 40012389-40017388 Theobroma cacao
Thecc1EG041898 5.0kb downstream 5.0kb downstream 8351 true scaffold_9: 40004038-40012388 Theobroma cacao
Thecc1EG041898 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40004038-40009037 Theobroma cacao
Thecc1EG041898 10.0kb upstream 10.0kb upstream 13351 true scaffold_9: 40009038-40022388 Theobroma cacao
Thecc1EG041898 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 40012389-40022388 Theobroma cacao
Thecc1EG041898 10.0kb downstream 10.0kb downstream 13351 true scaffold_9: 39999038-40012388 Theobroma cacao
Thecc1EG041898 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 39999038-40009037 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834835 5264 Brassicales-Malvales View MSA
124340755 5266 SBM View MSA
124237699 5268 Malvidae View MSA
124065450 5270 Rosid View MSA
123747463 5271 Pentapetalae View MSA
122794643 5272 Eudicot View MSA
122051104 5273 Angiosperm View MSA
121312296 5274 Embryophyte View MSA
123349483 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain