Gene : Thecc1EG041897 T. cacao v1.1
Defline:  (1 of 1) PTHR24073//PTHR24073:SF541//PTHR24073:SF561//PTHR24073:SF584 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABE1A // GTP-BINDING PROTEIN ARA-3-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3216
Name:  ? Thecc1EG041897 Secondary Identifier:  ? PAC:27430490
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041897 0.5kb upstream 0.5kb upstream 4044 true scaffold_9: 40004559-40008602 Theobroma cacao
Thecc1EG041897 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 40004559-40005058 Theobroma cacao
Thecc1EG041897 0.5kb downstream 0.5kb downstream 4044 true scaffold_9: 40005059-40009102 Theobroma cacao
Thecc1EG041897 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 40008603-40009102 Theobroma cacao
Thecc1EG041897 1.0kb upstream 1.0kb upstream 4544 true scaffold_9: 40004059-40008602 Theobroma cacao
Thecc1EG041897 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 40004059-40005058 Theobroma cacao
Thecc1EG041897 1.0kb downstream 1.0kb downstream 4544 true scaffold_9: 40005059-40009602 Theobroma cacao
Thecc1EG041897 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40008603-40009602 Theobroma cacao
Thecc1EG041897 2.0kb upstream 2.0kb upstream 5544 true scaffold_9: 40003059-40008602 Theobroma cacao
Thecc1EG041897 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 40003059-40005058 Theobroma cacao
Thecc1EG041897 2.0kb downstream 2.0kb downstream 5544 true scaffold_9: 40005059-40010602 Theobroma cacao
Thecc1EG041897 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40008603-40010602 Theobroma cacao
Thecc1EG041897 5.0kb upstream 5.0kb upstream 8544 true scaffold_9: 40000059-40008602 Theobroma cacao
Thecc1EG041897 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 40000059-40005058 Theobroma cacao
Thecc1EG041897 5.0kb downstream 5.0kb downstream 8544 true scaffold_9: 40005059-40013602 Theobroma cacao
Thecc1EG041897 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40008603-40013602 Theobroma cacao
Thecc1EG041897 10.0kb upstream 10.0kb upstream 13544 true scaffold_9: 39995059-40008602 Theobroma cacao
Thecc1EG041897 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 39995059-40005058 Theobroma cacao
Thecc1EG041897 10.0kb downstream 10.0kb downstream 13544 true scaffold_9: 40005059-40018602 Theobroma cacao
Thecc1EG041897 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 40008603-40018602 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839908 5264 Brassicales-Malvales View MSA
124351256 5266 SBM View MSA
124253513 5268 Malvidae View MSA
124070106 5270 Rosid View MSA
123750125 5271 Pentapetalae View MSA
122789123 5272 Eudicot View MSA
122050642 5273 Angiosperm View MSA
123429129 5275 Viridiplantae View MSA
121344035 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain