Gene : Thecc1EG041880 T. cacao v1.1

Defline:  (1 of 8) K11254 - histone H4 (H4) Genomic Order:  3200
Name:  ? Thecc1EG041880 Secondary Identifier:  ? PAC:27429572

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041880 0.5kb upstream 0.5kb upstream 1041 true scaffold_9: 39939033-39940073 Theobroma cacao
Thecc1EG041880 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 39939033-39939532 Theobroma cacao
Thecc1EG041880 0.5kb downstream 0.5kb downstream 1041 true scaffold_9: 39939533-39940573 Theobroma cacao
Thecc1EG041880 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 39940074-39940573 Theobroma cacao
Thecc1EG041880 1.0kb upstream 1.0kb upstream 1541 true scaffold_9: 39938533-39940073 Theobroma cacao
Thecc1EG041880 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 39938533-39939532 Theobroma cacao
Thecc1EG041880 1.0kb downstream 1.0kb downstream 1541 true scaffold_9: 39939533-39941073 Theobroma cacao
Thecc1EG041880 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 39940074-39941073 Theobroma cacao
Thecc1EG041880 2.0kb upstream 2.0kb upstream 2541 true scaffold_9: 39937533-39940073 Theobroma cacao
Thecc1EG041880 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 39937533-39939532 Theobroma cacao
Thecc1EG041880 2.0kb downstream 2.0kb downstream 2541 true scaffold_9: 39939533-39942073 Theobroma cacao
Thecc1EG041880 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 39940074-39942073 Theobroma cacao
Thecc1EG041880 5.0kb upstream 5.0kb upstream 5541 true scaffold_9: 39934533-39940073 Theobroma cacao
Thecc1EG041880 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 39934533-39939532 Theobroma cacao
Thecc1EG041880 5.0kb downstream 5.0kb downstream 5541 true scaffold_9: 39939533-39945073 Theobroma cacao
Thecc1EG041880 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 39940074-39945073 Theobroma cacao
Thecc1EG041880 10.0kb upstream 10.0kb upstream 10541 true scaffold_9: 39929533-39940073 Theobroma cacao
Thecc1EG041880 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 39929533-39939532 Theobroma cacao
Thecc1EG041880 10.0kb downstream 10.0kb downstream 10541 true scaffold_9: 39939533-39950073 Theobroma cacao
Thecc1EG041880 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 39940074-39950073 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841446 5264 Brassicales-Malvales View MSA
124349948 5266 SBM View MSA
124254537 5268 Malvidae View MSA
124071191 5270 Rosid View MSA
123744042 5271 Pentapetalae View MSA
122795736 5272 Eudicot View MSA
122049891 5273 Angiosperm View MSA
121350125 5274 Embryophyte View MSA
123427399 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain