Gene : Thecc1EG042159 T. cacao v1.1
Defline:  Uncharacterized protein Genomic Order:  3437
Name:  ? Thecc1EG042159 Secondary Identifier:  ? PAC:27428562
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042159 0.5kb upstream 0.5kb upstream 1109 true scaffold_9: 41312812-41313920 Theobroma cacao
Thecc1EG042159 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 41313421-41313920 Theobroma cacao
Thecc1EG042159 0.5kb downstream 0.5kb downstream 1109 true scaffold_9: 41312312-41313420 Theobroma cacao
Thecc1EG042159 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 41312312-41312811 Theobroma cacao
Thecc1EG042159 1.0kb upstream 1.0kb upstream 1609 true scaffold_9: 41312812-41314420 Theobroma cacao
Thecc1EG042159 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 41313421-41314420 Theobroma cacao
Thecc1EG042159 1.0kb downstream 1.0kb downstream 1609 true scaffold_9: 41311812-41313420 Theobroma cacao
Thecc1EG042159 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 41311812-41312811 Theobroma cacao
Thecc1EG042159 2.0kb upstream 2.0kb upstream 2609 true scaffold_9: 41312812-41315420 Theobroma cacao
Thecc1EG042159 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 41313421-41315420 Theobroma cacao
Thecc1EG042159 2.0kb downstream 2.0kb downstream 2609 true scaffold_9: 41310812-41313420 Theobroma cacao
Thecc1EG042159 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 41310812-41312811 Theobroma cacao
Thecc1EG042159 5.0kb upstream 5.0kb upstream 5609 true scaffold_9: 41312812-41318420 Theobroma cacao
Thecc1EG042159 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 41313421-41318420 Theobroma cacao
Thecc1EG042159 5.0kb downstream 5.0kb downstream 5609 true scaffold_9: 41307812-41313420 Theobroma cacao
Thecc1EG042159 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 41307812-41312811 Theobroma cacao
Thecc1EG042159 10.0kb upstream 10.0kb upstream 10609 true scaffold_9: 41312812-41323420 Theobroma cacao
Thecc1EG042159 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 41313421-41323420 Theobroma cacao
Thecc1EG042159 10.0kb downstream 10.0kb downstream 10609 true scaffold_9: 41302812-41313420 Theobroma cacao
Thecc1EG042159 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 41302812-41312811 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121524337 5273 Angiosperm Singleton cluster - no MSA
123822971 5264 Brassicales-Malvales Singleton cluster - no MSA
124319080 5266 SBM Singleton cluster - no MSA
124167669 5268 Malvidae Singleton cluster - no MSA
123891159 5270 Rosid Singleton cluster - no MSA
123473459 5271 Pentapetalae Singleton cluster - no MSA
122508743 5272 Eudicot Singleton cluster - no MSA
120797122 5274 Embryophyte Singleton cluster - no MSA
122838704 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain