Gene : Thecc1EG042096 T. cacao v1.1
Defline:  (1 of 2) PTHR18952//PTHR18952:SF111 - CARBONIC ANHYDRASE // ALPHA CARBONIC ANHYDRASE 3 Genomic Order:  3380
Name:  ? Thecc1EG042096 Secondary Identifier:  ? PAC:27427009
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao CYANCAT-PWY Theobroma cacao pathologic  
Tcacao PWY-241 Theobroma cacao pathologic  
Tcacao PWY-7115 Theobroma cacao pathologic  
Tcacao PWY-7117 Theobroma cacao pathologic  
Tcacao PWYQT-4429 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042096 0.5kb upstream 0.5kb upstream 2904 true scaffold_9: 41000838-41003741 Theobroma cacao
Thecc1EG042096 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 41003242-41003741 Theobroma cacao
Thecc1EG042096 0.5kb downstream 0.5kb downstream 2904 true scaffold_9: 41000338-41003241 Theobroma cacao
Thecc1EG042096 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 41000338-41000837 Theobroma cacao
Thecc1EG042096 1.0kb upstream 1.0kb upstream 3404 true scaffold_9: 41000838-41004241 Theobroma cacao
Thecc1EG042096 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 41003242-41004241 Theobroma cacao
Thecc1EG042096 1.0kb downstream 1.0kb downstream 3404 true scaffold_9: 40999838-41003241 Theobroma cacao
Thecc1EG042096 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40999838-41000837 Theobroma cacao
Thecc1EG042096 2.0kb upstream 2.0kb upstream 4404 true scaffold_9: 41000838-41005241 Theobroma cacao
Thecc1EG042096 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 41003242-41005241 Theobroma cacao
Thecc1EG042096 2.0kb downstream 2.0kb downstream 4404 true scaffold_9: 40998838-41003241 Theobroma cacao
Thecc1EG042096 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40998838-41000837 Theobroma cacao
Thecc1EG042096 5.0kb upstream 5.0kb upstream 7404 true scaffold_9: 41000838-41008241 Theobroma cacao
Thecc1EG042096 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 41003242-41008241 Theobroma cacao
Thecc1EG042096 5.0kb downstream 5.0kb downstream 7404 true scaffold_9: 40995838-41003241 Theobroma cacao
Thecc1EG042096 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40995838-41000837 Theobroma cacao
Thecc1EG042096 10.0kb upstream 10.0kb upstream 12404 true scaffold_9: 41000838-41013241 Theobroma cacao
Thecc1EG042096 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 41003242-41013241 Theobroma cacao
Thecc1EG042096 10.0kb downstream 10.0kb downstream 12404 true scaffold_9: 40990838-41003241 Theobroma cacao
Thecc1EG042096 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 40990838-41000837 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838880 5264 Brassicales-Malvales View MSA
124350350 5266 SBM View MSA
124244340 5268 Malvidae View MSA
124071031 5270 Rosid View MSA
123753559 5271 Pentapetalae View MSA
122795540 5272 Eudicot View MSA
122047303 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain