Gene : Thecc1EG042087 T. cacao v1.1
Defline:  (1 of 3) 4.3.1.24 - Phenylalanine ammonia-lyase Genomic Order:  3372
Name:  ? Thecc1EG042087 Secondary Identifier:  ? PAC:27428952
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1121 Theobroma cacao pathologic  
Tcacao PWY1F-467 Theobroma cacao pathologic  
Tcacao PWY-7186 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042087 0.5kb upstream 0.5kb upstream 13185 true scaffold_9: 40947295-40960479 Theobroma cacao
Thecc1EG042087 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 40947295-40947794 Theobroma cacao
Thecc1EG042087 0.5kb downstream 0.5kb downstream 13185 true scaffold_9: 40947795-40960979 Theobroma cacao
Thecc1EG042087 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 40960480-40960979 Theobroma cacao
Thecc1EG042087 1.0kb upstream 1.0kb upstream 13685 true scaffold_9: 40946795-40960479 Theobroma cacao
Thecc1EG042087 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 40946795-40947794 Theobroma cacao
Thecc1EG042087 1.0kb downstream 1.0kb downstream 13685 true scaffold_9: 40947795-40961479 Theobroma cacao
Thecc1EG042087 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40960480-40961479 Theobroma cacao
Thecc1EG042087 2.0kb upstream 2.0kb upstream 14685 true scaffold_9: 40945795-40960479 Theobroma cacao
Thecc1EG042087 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 40945795-40947794 Theobroma cacao
Thecc1EG042087 2.0kb downstream 2.0kb downstream 14685 true scaffold_9: 40947795-40962479 Theobroma cacao
Thecc1EG042087 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40960480-40962479 Theobroma cacao
Thecc1EG042087 5.0kb upstream 5.0kb upstream 17685 true scaffold_9: 40942795-40960479 Theobroma cacao
Thecc1EG042087 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 40942795-40947794 Theobroma cacao
Thecc1EG042087 5.0kb downstream 5.0kb downstream 17685 true scaffold_9: 40947795-40965479 Theobroma cacao
Thecc1EG042087 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40960480-40965479 Theobroma cacao
Thecc1EG042087 10.0kb upstream 10.0kb upstream 22685 true scaffold_9: 40937795-40960479 Theobroma cacao
Thecc1EG042087 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 40937795-40947794 Theobroma cacao
Thecc1EG042087 10.0kb downstream 10.0kb downstream 22685 true scaffold_9: 40947795-40970479 Theobroma cacao
Thecc1EG042087 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 40960480-40970479 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823477 5264 Brassicales-Malvales Singleton cluster - no MSA
124347425 5266 SBM View MSA
124180941 5268 Malvidae View MSA
124072486 5270 Rosid View MSA
123747775 5271 Pentapetalae View MSA
122795347 5272 Eudicot View MSA
122043246 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain