Gene : Thecc1EG042039 T. cacao v1.1

Defline:  (1 of 1) 3.1.13.3 - Oligonucleotidase Genomic Order:  3334
Name:  ? Thecc1EG042039 Secondary Identifier:  ? PAC:27428412

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042039 0.5kb upstream 0.5kb upstream 3578 true scaffold_9: 40711578-40715155 Theobroma cacao
Thecc1EG042039 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 40714656-40715155 Theobroma cacao
Thecc1EG042039 0.5kb downstream 0.5kb downstream 3578 true scaffold_9: 40711078-40714655 Theobroma cacao
Thecc1EG042039 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 40711078-40711577 Theobroma cacao
Thecc1EG042039 1.0kb upstream 1.0kb upstream 4078 true scaffold_9: 40711578-40715655 Theobroma cacao
Thecc1EG042039 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 40714656-40715655 Theobroma cacao
Thecc1EG042039 1.0kb downstream 1.0kb downstream 4078 true scaffold_9: 40710578-40714655 Theobroma cacao
Thecc1EG042039 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40710578-40711577 Theobroma cacao
Thecc1EG042039 2.0kb upstream 2.0kb upstream 5078 true scaffold_9: 40711578-40716655 Theobroma cacao
Thecc1EG042039 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 40714656-40716655 Theobroma cacao
Thecc1EG042039 2.0kb downstream 2.0kb downstream 5078 true scaffold_9: 40709578-40714655 Theobroma cacao
Thecc1EG042039 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40709578-40711577 Theobroma cacao
Thecc1EG042039 5.0kb upstream 5.0kb upstream 8078 true scaffold_9: 40711578-40719655 Theobroma cacao
Thecc1EG042039 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 40714656-40719655 Theobroma cacao
Thecc1EG042039 5.0kb downstream 5.0kb downstream 8078 true scaffold_9: 40706578-40714655 Theobroma cacao
Thecc1EG042039 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40706578-40711577 Theobroma cacao
Thecc1EG042039 10.0kb upstream 10.0kb upstream 13078 true scaffold_9: 40711578-40724655 Theobroma cacao
Thecc1EG042039 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 40714656-40724655 Theobroma cacao
Thecc1EG042039 10.0kb downstream 10.0kb downstream 13078 true scaffold_9: 40701578-40714655 Theobroma cacao
Thecc1EG042039 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 40701578-40711577 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831757 5264 Brassicales-Malvales View MSA
124351233 5266 SBM View MSA
124240142 5268 Malvidae View MSA
124062550 5270 Rosid View MSA
123741047 5271 Pentapetalae View MSA
122789604 5272 Eudicot View MSA
122046409 5273 Angiosperm View MSA
121344784 5274 Embryophyte View MSA
123423966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain