Gene : Thecc1EG042290 T. cacao v1.1
Defline:  (1 of 1) PTHR23336//PTHR23336:SF23 - ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. // SUBFAMILY NOT NAMED Genomic Order:  3566
Name:  ? Thecc1EG042290 Secondary Identifier:  ? PAC:27425655
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042290 0.5kb upstream 0.5kb upstream 7522 true scaffold_9: 41842711-41850232 Theobroma cacao
Thecc1EG042290 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 41849733-41850232 Theobroma cacao
Thecc1EG042290 0.5kb downstream 0.5kb downstream 7522 true scaffold_9: 41842211-41849732 Theobroma cacao
Thecc1EG042290 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 41842211-41842710 Theobroma cacao
Thecc1EG042290 1.0kb upstream 1.0kb upstream 8022 true scaffold_9: 41842711-41850732 Theobroma cacao
Thecc1EG042290 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 41849733-41850732 Theobroma cacao
Thecc1EG042290 1.0kb downstream 1.0kb downstream 8022 true scaffold_9: 41841711-41849732 Theobroma cacao
Thecc1EG042290 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 41841711-41842710 Theobroma cacao
Thecc1EG042290 2.0kb upstream 2.0kb upstream 9022 true scaffold_9: 41842711-41851732 Theobroma cacao
Thecc1EG042290 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 41849733-41851732 Theobroma cacao
Thecc1EG042290 2.0kb downstream 2.0kb downstream 9022 true scaffold_9: 41840711-41849732 Theobroma cacao
Thecc1EG042290 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 41840711-41842710 Theobroma cacao
Thecc1EG042290 5.0kb upstream 5.0kb upstream 12022 true scaffold_9: 41842711-41854732 Theobroma cacao
Thecc1EG042290 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 41849733-41854732 Theobroma cacao
Thecc1EG042290 5.0kb downstream 5.0kb downstream 12022 true scaffold_9: 41837711-41849732 Theobroma cacao
Thecc1EG042290 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 41837711-41842710 Theobroma cacao
Thecc1EG042290 10.0kb upstream 10.0kb upstream 17022 true scaffold_9: 41842711-41859732 Theobroma cacao
Thecc1EG042290 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 41849733-41859732 Theobroma cacao
Thecc1EG042290 10.0kb downstream 10.0kb downstream 17022 true scaffold_9: 41832711-41849732 Theobroma cacao
Thecc1EG042290 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 41832711-41842710 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830975 5264 Brassicales-Malvales View MSA
124339892 5266 SBM View MSA
124251846 5268 Malvidae View MSA
124062028 5270 Rosid View MSA
123749673 5271 Pentapetalae View MSA
122797219 5272 Eudicot View MSA
122049123 5273 Angiosperm View MSA
121350931 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain