Gene : Thecc1EG042282 T. cacao v1.1

Defline:  (1 of 3) PTHR31867:SF22 - EXPANSIN-A8 Genomic Order:  3558
Name:  ? Thecc1EG042282 Secondary Identifier:  ? PAC:27429247

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042282 0.5kb upstream 0.5kb upstream 1923 true scaffold_9: 41813706-41815628 Theobroma cacao
Thecc1EG042282 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 41815129-41815628 Theobroma cacao
Thecc1EG042282 0.5kb downstream 0.5kb downstream 1923 true scaffold_9: 41813206-41815128 Theobroma cacao
Thecc1EG042282 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 41813206-41813705 Theobroma cacao
Thecc1EG042282 1.0kb upstream 1.0kb upstream 2423 true scaffold_9: 41813706-41816128 Theobroma cacao
Thecc1EG042282 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 41815129-41816128 Theobroma cacao
Thecc1EG042282 1.0kb downstream 1.0kb downstream 2423 true scaffold_9: 41812706-41815128 Theobroma cacao
Thecc1EG042282 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 41812706-41813705 Theobroma cacao
Thecc1EG042282 2.0kb upstream 2.0kb upstream 3423 true scaffold_9: 41813706-41817128 Theobroma cacao
Thecc1EG042282 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 41815129-41817128 Theobroma cacao
Thecc1EG042282 2.0kb downstream 2.0kb downstream 3423 true scaffold_9: 41811706-41815128 Theobroma cacao
Thecc1EG042282 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 41811706-41813705 Theobroma cacao
Thecc1EG042282 5.0kb upstream 5.0kb upstream 6423 true scaffold_9: 41813706-41820128 Theobroma cacao
Thecc1EG042282 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 41815129-41820128 Theobroma cacao
Thecc1EG042282 5.0kb downstream 5.0kb downstream 6423 true scaffold_9: 41808706-41815128 Theobroma cacao
Thecc1EG042282 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 41808706-41813705 Theobroma cacao
Thecc1EG042282 10.0kb upstream 10.0kb upstream 11423 true scaffold_9: 41813706-41825128 Theobroma cacao
Thecc1EG042282 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 41815129-41825128 Theobroma cacao
Thecc1EG042282 10.0kb downstream 10.0kb downstream 11423 true scaffold_9: 41803706-41815128 Theobroma cacao
Thecc1EG042282 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 41803706-41813705 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839732 5264 Brassicales-Malvales View MSA
124349436 5266 SBM View MSA
124239479 5268 Malvidae View MSA
124070861 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain