Gene : Thecc1EG042210 T. cacao v1.1
Defline:  (1 of 1) PTHR33405:SF1 - PROTEIN FLC EXPRESSOR Genomic Order:  3488
Name:  ? Thecc1EG042210 Secondary Identifier:  ? PAC:27428844
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042210 0.5kb upstream 0.5kb upstream 3058 true scaffold_9: 41535536-41538593 Theobroma cacao
Thecc1EG042210 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 41538094-41538593 Theobroma cacao
Thecc1EG042210 0.5kb downstream 0.5kb downstream 3058 true scaffold_9: 41535036-41538093 Theobroma cacao
Thecc1EG042210 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 41535036-41535535 Theobroma cacao
Thecc1EG042210 1.0kb upstream 1.0kb upstream 3558 true scaffold_9: 41535536-41539093 Theobroma cacao
Thecc1EG042210 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 41538094-41539093 Theobroma cacao
Thecc1EG042210 1.0kb downstream 1.0kb downstream 3558 true scaffold_9: 41534536-41538093 Theobroma cacao
Thecc1EG042210 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 41534536-41535535 Theobroma cacao
Thecc1EG042210 2.0kb upstream 2.0kb upstream 4558 true scaffold_9: 41535536-41540093 Theobroma cacao
Thecc1EG042210 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 41538094-41540093 Theobroma cacao
Thecc1EG042210 2.0kb downstream 2.0kb downstream 4558 true scaffold_9: 41533536-41538093 Theobroma cacao
Thecc1EG042210 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 41533536-41535535 Theobroma cacao
Thecc1EG042210 5.0kb upstream 5.0kb upstream 7558 true scaffold_9: 41535536-41543093 Theobroma cacao
Thecc1EG042210 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 41538094-41543093 Theobroma cacao
Thecc1EG042210 5.0kb downstream 5.0kb downstream 7558 true scaffold_9: 41530536-41538093 Theobroma cacao
Thecc1EG042210 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 41530536-41535535 Theobroma cacao
Thecc1EG042210 10.0kb upstream 10.0kb upstream 12558 true scaffold_9: 41535536-41548093 Theobroma cacao
Thecc1EG042210 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 41538094-41548093 Theobroma cacao
Thecc1EG042210 10.0kb downstream 10.0kb downstream 12558 true scaffold_9: 41525536-41538093 Theobroma cacao
Thecc1EG042210 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 41525536-41535535 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026776 5273 Angiosperm View MSA
123834343 5264 Brassicales-Malvales View MSA
124342935 5266 SBM View MSA
124239345 5268 Malvidae View MSA
124060836 5270 Rosid View MSA
123743028 5271 Pentapetalae View MSA
122794369 5272 Eudicot View MSA
121296551 5274 Embryophyte View MSA
123334697 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain