Gene : Thecc1EG042194 T. cacao v1.1
Defline:  (1 of 46) PF03514 - GRAS domain family (GRAS) Genomic Order:  3472
Name:  ? Thecc1EG042194 Secondary Identifier:  ? PAC:27426190
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042194 0.5kb upstream 0.5kb upstream 3363 true scaffold_9: 41462867-41466229 Theobroma cacao
Thecc1EG042194 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 41465730-41466229 Theobroma cacao
Thecc1EG042194 0.5kb downstream 0.5kb downstream 3363 true scaffold_9: 41462367-41465729 Theobroma cacao
Thecc1EG042194 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 41462367-41462866 Theobroma cacao
Thecc1EG042194 1.0kb upstream 1.0kb upstream 3863 true scaffold_9: 41462867-41466729 Theobroma cacao
Thecc1EG042194 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 41465730-41466729 Theobroma cacao
Thecc1EG042194 1.0kb downstream 1.0kb downstream 3863 true scaffold_9: 41461867-41465729 Theobroma cacao
Thecc1EG042194 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 41461867-41462866 Theobroma cacao
Thecc1EG042194 2.0kb upstream 2.0kb upstream 4863 true scaffold_9: 41462867-41467729 Theobroma cacao
Thecc1EG042194 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 41465730-41467729 Theobroma cacao
Thecc1EG042194 2.0kb downstream 2.0kb downstream 4863 true scaffold_9: 41460867-41465729 Theobroma cacao
Thecc1EG042194 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 41460867-41462866 Theobroma cacao
Thecc1EG042194 5.0kb upstream 5.0kb upstream 7863 true scaffold_9: 41462867-41470729 Theobroma cacao
Thecc1EG042194 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 41465730-41470729 Theobroma cacao
Thecc1EG042194 5.0kb downstream 5.0kb downstream 7863 true scaffold_9: 41457867-41465729 Theobroma cacao
Thecc1EG042194 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 41457867-41462866 Theobroma cacao
Thecc1EG042194 10.0kb upstream 10.0kb upstream 12863 true scaffold_9: 41462867-41475729 Theobroma cacao
Thecc1EG042194 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 41465730-41475729 Theobroma cacao
Thecc1EG042194 10.0kb downstream 10.0kb downstream 12863 true scaffold_9: 41452867-41465729 Theobroma cacao
Thecc1EG042194 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 41452867-41462866 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121579300 5273 Angiosperm View MSA
123825793 5264 Brassicales-Malvales View MSA
124320757 5266 SBM View MSA
124249059 5268 Malvidae View MSA
123952316 5270 Rosid View MSA
123530145 5271 Pentapetalae View MSA
122565118 5272 Eudicot View MSA
120851764 5274 Embryophyte View MSA
122892932 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain