Gene : Thecc1EG042182 T. cacao v1.1
Defline:  (1 of 1) PTHR14732:SF0 - RNA POLYMERASE II SUBUNIT B1 CTD PHOSPHATASE RPAP2-RELATED Genomic Order:  3460
Name:  ? Thecc1EG042182 Secondary Identifier:  ? PAC:27429059
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042182 0.5kb upstream 0.5kb upstream 5350 true scaffold_9: 41412192-41417541 Theobroma cacao
Thecc1EG042182 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 41417042-41417541 Theobroma cacao
Thecc1EG042182 0.5kb downstream 0.5kb downstream 5350 true scaffold_9: 41411692-41417041 Theobroma cacao
Thecc1EG042182 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 41411692-41412191 Theobroma cacao
Thecc1EG042182 1.0kb upstream 1.0kb upstream 5850 true scaffold_9: 41412192-41418041 Theobroma cacao
Thecc1EG042182 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 41417042-41418041 Theobroma cacao
Thecc1EG042182 1.0kb downstream 1.0kb downstream 5850 true scaffold_9: 41411192-41417041 Theobroma cacao
Thecc1EG042182 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 41411192-41412191 Theobroma cacao
Thecc1EG042182 2.0kb upstream 2.0kb upstream 6850 true scaffold_9: 41412192-41419041 Theobroma cacao
Thecc1EG042182 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 41417042-41419041 Theobroma cacao
Thecc1EG042182 2.0kb downstream 2.0kb downstream 6850 true scaffold_9: 41410192-41417041 Theobroma cacao
Thecc1EG042182 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 41410192-41412191 Theobroma cacao
Thecc1EG042182 5.0kb upstream 5.0kb upstream 9850 true scaffold_9: 41412192-41422041 Theobroma cacao
Thecc1EG042182 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 41417042-41422041 Theobroma cacao
Thecc1EG042182 5.0kb downstream 5.0kb downstream 9850 true scaffold_9: 41407192-41417041 Theobroma cacao
Thecc1EG042182 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 41407192-41412191 Theobroma cacao
Thecc1EG042182 10.0kb upstream 10.0kb upstream 14850 true scaffold_9: 41412192-41427041 Theobroma cacao
Thecc1EG042182 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 41417042-41427041 Theobroma cacao
Thecc1EG042182 10.0kb downstream 10.0kb downstream 14850 true scaffold_9: 41402192-41417041 Theobroma cacao
Thecc1EG042182 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 41402192-41412191 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833976 5264 Brassicales-Malvales View MSA
124321911 5266 SBM View MSA
124247765 5268 Malvidae View MSA
124069329 5270 Rosid View MSA
123741473 5271 Pentapetalae View MSA
122794606 5272 Eudicot View MSA
122046248 5273 Angiosperm View MSA
121347996 5274 Embryophyte View MSA
123426503 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain