Gene : Thecc1EG042172 T. cacao v1.1
Defline:  (1 of 6) 4.1.1.1 - Pyruvate decarboxylase / Pyruvic decarboxylase Genomic Order:  3450
Name:  ? Thecc1EG042172 Secondary Identifier:  ? PAC:27425697
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5486 Theobroma cacao pathologic  
Tcacao PWY-6330 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042172 0.5kb upstream 0.5kb upstream 4013 true scaffold_9: 41377725-41381737 Theobroma cacao
Thecc1EG042172 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 41377725-41378224 Theobroma cacao
Thecc1EG042172 0.5kb downstream 0.5kb downstream 4013 true scaffold_9: 41378225-41382237 Theobroma cacao
Thecc1EG042172 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 41381738-41382237 Theobroma cacao
Thecc1EG042172 1.0kb upstream 1.0kb upstream 4513 true scaffold_9: 41377225-41381737 Theobroma cacao
Thecc1EG042172 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 41377225-41378224 Theobroma cacao
Thecc1EG042172 1.0kb downstream 1.0kb downstream 4513 true scaffold_9: 41378225-41382737 Theobroma cacao
Thecc1EG042172 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 41381738-41382737 Theobroma cacao
Thecc1EG042172 2.0kb upstream 2.0kb upstream 5513 true scaffold_9: 41376225-41381737 Theobroma cacao
Thecc1EG042172 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 41376225-41378224 Theobroma cacao
Thecc1EG042172 2.0kb downstream 2.0kb downstream 5513 true scaffold_9: 41378225-41383737 Theobroma cacao
Thecc1EG042172 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 41381738-41383737 Theobroma cacao
Thecc1EG042172 5.0kb upstream 5.0kb upstream 8513 true scaffold_9: 41373225-41381737 Theobroma cacao
Thecc1EG042172 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 41373225-41378224 Theobroma cacao
Thecc1EG042172 5.0kb downstream 5.0kb downstream 8513 true scaffold_9: 41378225-41386737 Theobroma cacao
Thecc1EG042172 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 41381738-41386737 Theobroma cacao
Thecc1EG042172 10.0kb upstream 10.0kb upstream 13513 true scaffold_9: 41368225-41381737 Theobroma cacao
Thecc1EG042172 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 41368225-41378224 Theobroma cacao
Thecc1EG042172 10.0kb downstream 10.0kb downstream 13513 true scaffold_9: 41378225-41391737 Theobroma cacao
Thecc1EG042172 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 41381738-41391737 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825006 5264 Brassicales-Malvales View MSA
124320412 5266 SBM View MSA
124168630 5268 Malvidae View MSA
124061112 5270 Rosid View MSA
123745857 5271 Pentapetalae View MSA
122791773 5272 Eudicot View MSA
122042059 5273 Angiosperm View MSA
121351042 5274 Embryophyte View MSA
123426958 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain