Gene : Thecc1EG047092 T. cacao v1.1
Defline:  Translation initiation factor IF-2 (63%P) Genomic Order:  421
Name:  ? Thecc1EG047092 Secondary Identifier:  ? PAC:27426984
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG047092 0.5kb upstream 0.5kb upstream 5104 true scaffold_9: 2234200-2239303 Theobroma cacao
Thecc1EG047092 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2234200-2234699 Theobroma cacao
Thecc1EG047092 0.5kb downstream 0.5kb downstream 5104 true scaffold_9: 2234700-2239803 Theobroma cacao
Thecc1EG047092 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2239304-2239803 Theobroma cacao
Thecc1EG047092 1.0kb upstream 1.0kb upstream 5604 true scaffold_9: 2233700-2239303 Theobroma cacao
Thecc1EG047092 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2233700-2234699 Theobroma cacao
Thecc1EG047092 1.0kb downstream 1.0kb downstream 5604 true scaffold_9: 2234700-2240303 Theobroma cacao
Thecc1EG047092 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2239304-2240303 Theobroma cacao
Thecc1EG047092 2.0kb upstream 2.0kb upstream 6604 true scaffold_9: 2232700-2239303 Theobroma cacao
Thecc1EG047092 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2232700-2234699 Theobroma cacao
Thecc1EG047092 2.0kb downstream 2.0kb downstream 6604 true scaffold_9: 2234700-2241303 Theobroma cacao
Thecc1EG047092 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2239304-2241303 Theobroma cacao
Thecc1EG047092 5.0kb upstream 5.0kb upstream 9604 true scaffold_9: 2229700-2239303 Theobroma cacao
Thecc1EG047092 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2229700-2234699 Theobroma cacao
Thecc1EG047092 5.0kb downstream 5.0kb downstream 9604 true scaffold_9: 2234700-2244303 Theobroma cacao
Thecc1EG047092 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2239304-2244303 Theobroma cacao
Thecc1EG047092 10.0kb upstream 10.0kb upstream 14604 true scaffold_9: 2224700-2239303 Theobroma cacao
Thecc1EG047092 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2224700-2234699 Theobroma cacao
Thecc1EG047092 10.0kb downstream 10.0kb downstream 14604 true scaffold_9: 2234700-2249303 Theobroma cacao
Thecc1EG047092 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2239304-2249303 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837334 5264 Brassicales-Malvales View MSA
124346828 5266 SBM View MSA
124249981 5268 Malvidae View MSA
124069500 5270 Rosid View MSA
123741982 5271 Pentapetalae View MSA
122794636 5272 Eudicot View MSA
122048476 5273 Angiosperm View MSA
121348049 5274 Embryophyte View MSA
123424433 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain