Gene : Thecc1EG046916 T. cacao v1.1
Defline:  (1 of 2) PTHR27001//PTHR27001:SF55 - FAMILY NOT NAMED // PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK5-RELATED Genomic Order:  372
Name:  ? Thecc1EG046916 Secondary Identifier:  ? PAC:27431235
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046916 0.5kb upstream 0.5kb upstream 5750 true scaffold_9: 1991898-1997647 Theobroma cacao
Thecc1EG046916 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1991898-1992397 Theobroma cacao
Thecc1EG046916 0.5kb downstream 0.5kb downstream 5750 true scaffold_9: 1992398-1998147 Theobroma cacao
Thecc1EG046916 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1997648-1998147 Theobroma cacao
Thecc1EG046916 1.0kb upstream 1.0kb upstream 6250 true scaffold_9: 1991398-1997647 Theobroma cacao
Thecc1EG046916 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1991398-1992397 Theobroma cacao
Thecc1EG046916 1.0kb downstream 1.0kb downstream 6250 true scaffold_9: 1992398-1998647 Theobroma cacao
Thecc1EG046916 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1997648-1998647 Theobroma cacao
Thecc1EG046916 2.0kb upstream 2.0kb upstream 7250 true scaffold_9: 1990398-1997647 Theobroma cacao
Thecc1EG046916 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1990398-1992397 Theobroma cacao
Thecc1EG046916 2.0kb downstream 2.0kb downstream 7250 true scaffold_9: 1992398-1999647 Theobroma cacao
Thecc1EG046916 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1997648-1999647 Theobroma cacao
Thecc1EG046916 5.0kb upstream 5.0kb upstream 10250 true scaffold_9: 1987398-1997647 Theobroma cacao
Thecc1EG046916 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1987398-1992397 Theobroma cacao
Thecc1EG046916 5.0kb downstream 5.0kb downstream 10250 true scaffold_9: 1992398-2002647 Theobroma cacao
Thecc1EG046916 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1997648-2002647 Theobroma cacao
Thecc1EG046916 10.0kb upstream 10.0kb upstream 15250 true scaffold_9: 1982398-1997647 Theobroma cacao
Thecc1EG046916 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1982398-1992397 Theobroma cacao
Thecc1EG046916 10.0kb downstream 10.0kb downstream 15250 true scaffold_9: 1992398-2007647 Theobroma cacao
Thecc1EG046916 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1997648-2007647 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833958 5264 Brassicales-Malvales View MSA
124321908 5266 SBM View MSA
124253534 5268 Malvidae View MSA
124074896 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain