Gene : Thecc1EG046911 T. cacao v1.1
Defline:  (1 of 1) PTHR31356//PTHR31356:SF4 - FAMILY NOT NAMED // L-ASCORBATE PEROXIDASE 6-RELATED Genomic Order:  237
Name:  ? Thecc1EG046911 Secondary Identifier:  ? PAC:27430921
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-2261 Theobroma cacao pathologic  
Tcacao PWY-6959 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046911 0.5kb upstream 0.5kb upstream 3654 true scaffold_9: 1291073-1294726 Theobroma cacao
Thecc1EG046911 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1291073-1291572 Theobroma cacao
Thecc1EG046911 0.5kb downstream 0.5kb downstream 3654 true scaffold_9: 1291573-1295226 Theobroma cacao
Thecc1EG046911 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1294727-1295226 Theobroma cacao
Thecc1EG046911 1.0kb upstream 1.0kb upstream 4154 true scaffold_9: 1290573-1294726 Theobroma cacao
Thecc1EG046911 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1290573-1291572 Theobroma cacao
Thecc1EG046911 1.0kb downstream 1.0kb downstream 4154 true scaffold_9: 1291573-1295726 Theobroma cacao
Thecc1EG046911 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1294727-1295726 Theobroma cacao
Thecc1EG046911 2.0kb upstream 2.0kb upstream 5154 true scaffold_9: 1289573-1294726 Theobroma cacao
Thecc1EG046911 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1289573-1291572 Theobroma cacao
Thecc1EG046911 2.0kb downstream 2.0kb downstream 5154 true scaffold_9: 1291573-1296726 Theobroma cacao
Thecc1EG046911 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1294727-1296726 Theobroma cacao
Thecc1EG046911 5.0kb upstream 5.0kb upstream 8154 true scaffold_9: 1286573-1294726 Theobroma cacao
Thecc1EG046911 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1286573-1291572 Theobroma cacao
Thecc1EG046911 5.0kb downstream 5.0kb downstream 8154 true scaffold_9: 1291573-1299726 Theobroma cacao
Thecc1EG046911 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1294727-1299726 Theobroma cacao
Thecc1EG046911 10.0kb upstream 10.0kb upstream 13154 true scaffold_9: 1281573-1294726 Theobroma cacao
Thecc1EG046911 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1281573-1291572 Theobroma cacao
Thecc1EG046911 10.0kb downstream 10.0kb downstream 13154 true scaffold_9: 1291573-1304726 Theobroma cacao
Thecc1EG046911 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1294727-1304726 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834237 5264 Brassicales-Malvales View MSA
124342158 5266 SBM View MSA
124239961 5268 Malvidae View MSA
124065739 5270 Rosid View MSA
123737315 5271 Pentapetalae View MSA
122787755 5272 Eudicot View MSA
122044466 5273 Angiosperm View MSA
121347690 5274 Embryophyte View MSA
123425529 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain