Gene : Oeu013965.1 O. europaea v1.0
Defline:  (1 of 15) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  2112
Name:  ? Oeu013965.1 Secondary Identifier:  ? PAC:37720493
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Oeu013965.1 0.5kb upstream 0.5kb upstream 2760 true chr11: 36637665-36640424 Olea europaea
Oeu013965.1 0.5kb upstream 0.5kb upstream 500 false chr11: 36637665-36638164 Olea europaea
Oeu013965.1 0.5kb downstream 0.5kb downstream 2760 true chr11: 36638165-36640924 Olea europaea
Oeu013965.1 0.5kb downstream 0.5kb downstream 500 false chr11: 36640425-36640924 Olea europaea
Oeu013965.1 1.0kb upstream 1.0kb upstream 3260 true chr11: 36637165-36640424 Olea europaea
Oeu013965.1 1.0kb upstream 1.0kb upstream 1000 false chr11: 36637165-36638164 Olea europaea
Oeu013965.1 1.0kb downstream 1.0kb downstream 3260 true chr11: 36638165-36641424 Olea europaea
Oeu013965.1 1.0kb downstream 1.0kb downstream 1000 false chr11: 36640425-36641424 Olea europaea
Oeu013965.1 2.0kb upstream 2.0kb upstream 4260 true chr11: 36636165-36640424 Olea europaea
Oeu013965.1 2.0kb upstream 2.0kb upstream 2000 false chr11: 36636165-36638164 Olea europaea
Oeu013965.1 2.0kb downstream 2.0kb downstream 4260 true chr11: 36638165-36642424 Olea europaea
Oeu013965.1 2.0kb downstream 2.0kb downstream 2000 false chr11: 36640425-36642424 Olea europaea
Oeu013965.1 5.0kb upstream 5.0kb upstream 7260 true chr11: 36633165-36640424 Olea europaea
Oeu013965.1 5.0kb upstream 5.0kb upstream 5000 false chr11: 36633165-36638164 Olea europaea
Oeu013965.1 5.0kb downstream 5.0kb downstream 7260 true chr11: 36638165-36645424 Olea europaea
Oeu013965.1 5.0kb downstream 5.0kb downstream 5000 false chr11: 36640425-36645424 Olea europaea
Oeu013965.1 10.0kb upstream 10.0kb upstream 12260 true chr11: 36628165-36640424 Olea europaea
Oeu013965.1 10.0kb upstream 10.0kb upstream 10000 false chr11: 36628165-36638164 Olea europaea
Oeu013965.1 10.0kb downstream 10.0kb downstream 12260 true chr11: 36638165-36650424 Olea europaea
Oeu013965.1 10.0kb downstream 10.0kb downstream 10000 false chr11: 36640425-36650424 Olea europaea

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480329 5263 Asterids View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain