Gene : Oeu049408.1 O. europaea v1.0
Defline:  (1 of 15) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  619
Name:  ? Oeu049408.1 Secondary Identifier:  ? PAC:37736084
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Oeu049408.1 0.5kb upstream 0.5kb upstream 5737 true chr6: 10432480-10438216 Olea europaea
Oeu049408.1 0.5kb upstream 0.5kb upstream 500 false chr6: 10437717-10438216 Olea europaea
Oeu049408.1 0.5kb downstream 0.5kb downstream 5737 true chr6: 10431980-10437716 Olea europaea
Oeu049408.1 0.5kb downstream 0.5kb downstream 500 false chr6: 10431980-10432479 Olea europaea
Oeu049408.1 1.0kb upstream 1.0kb upstream 6237 true chr6: 10432480-10438716 Olea europaea
Oeu049408.1 1.0kb upstream 1.0kb upstream 1000 false chr6: 10437717-10438716 Olea europaea
Oeu049408.1 1.0kb downstream 1.0kb downstream 6237 true chr6: 10431480-10437716 Olea europaea
Oeu049408.1 1.0kb downstream 1.0kb downstream 1000 false chr6: 10431480-10432479 Olea europaea
Oeu049408.1 2.0kb upstream 2.0kb upstream 7237 true chr6: 10432480-10439716 Olea europaea
Oeu049408.1 2.0kb upstream 2.0kb upstream 2000 false chr6: 10437717-10439716 Olea europaea
Oeu049408.1 2.0kb downstream 2.0kb downstream 7237 true chr6: 10430480-10437716 Olea europaea
Oeu049408.1 2.0kb downstream 2.0kb downstream 2000 false chr6: 10430480-10432479 Olea europaea
Oeu049408.1 5.0kb upstream 5.0kb upstream 10237 true chr6: 10432480-10442716 Olea europaea
Oeu049408.1 5.0kb upstream 5.0kb upstream 5000 false chr6: 10437717-10442716 Olea europaea
Oeu049408.1 5.0kb downstream 5.0kb downstream 10237 true chr6: 10427480-10437716 Olea europaea
Oeu049408.1 5.0kb downstream 5.0kb downstream 5000 false chr6: 10427480-10432479 Olea europaea
Oeu049408.1 10.0kb upstream 10.0kb upstream 15237 true chr6: 10432480-10447716 Olea europaea
Oeu049408.1 10.0kb upstream 10.0kb upstream 10000 false chr6: 10437717-10447716 Olea europaea
Oeu049408.1 10.0kb downstream 10.0kb downstream 15237 true chr6: 10422480-10437716 Olea europaea
Oeu049408.1 10.0kb downstream 10.0kb downstream 10000 false chr6: 10422480-10432479 Olea europaea

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479350 5263 Asterids View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain