Gene : Oeu004788.1 O. europaea v1.0
Defline:  (1 of 15) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  1
Name:  ? Oeu004788.1 Secondary Identifier:  ? PAC:37737227
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Oeu004788.1 0.5kb upstream 0.5kb upstream 2646 true scaffold11773: 556-3201 Olea europaea
Oeu004788.1 0.5kb upstream 0.5kb upstream 500 false scaffold11773: 2702-3201 Olea europaea
Oeu004788.1 0.5kb downstream 0.5kb downstream 2646 true scaffold11773: 56-2701 Olea europaea
Oeu004788.1 0.5kb downstream 0.5kb downstream 500 false scaffold11773: 56-555 Olea europaea
Oeu004788.1 1.0kb upstream 1.0kb upstream 3031 true scaffold11773: 556-3586 Olea europaea
Oeu004788.1 1.0kb upstream 1.0kb upstream 885 false scaffold11773: 2702-3586 Olea europaea
Oeu004788.1 1.0kb downstream 1.0kb downstream 2701 true scaffold11773: 1-2701 Olea europaea
Oeu004788.1 1.0kb downstream 1.0kb downstream 555 false scaffold11773: 1-555 Olea europaea
Oeu004788.1 2.0kb upstream 2.0kb upstream 3031 true scaffold11773: 556-3586 Olea europaea
Oeu004788.1 2.0kb upstream 2.0kb upstream 885 false scaffold11773: 2702-3586 Olea europaea
Oeu004788.1 2.0kb downstream 2.0kb downstream 2701 true scaffold11773: 1-2701 Olea europaea
Oeu004788.1 2.0kb downstream 2.0kb downstream 555 false scaffold11773: 1-555 Olea europaea
Oeu004788.1 5.0kb upstream 5.0kb upstream 3031 true scaffold11773: 556-3586 Olea europaea
Oeu004788.1 5.0kb upstream 5.0kb upstream 885 false scaffold11773: 2702-3586 Olea europaea
Oeu004788.1 5.0kb downstream 5.0kb downstream 2701 true scaffold11773: 1-2701 Olea europaea
Oeu004788.1 5.0kb downstream 5.0kb downstream 555 false scaffold11773: 1-555 Olea europaea
Oeu004788.1 10.0kb upstream 10.0kb upstream 3031 true scaffold11773: 556-3586 Olea europaea
Oeu004788.1 10.0kb upstream 10.0kb upstream 885 false scaffold11773: 2702-3586 Olea europaea
Oeu004788.1 10.0kb downstream 10.0kb downstream 2701 true scaffold11773: 1-2701 Olea europaea
Oeu004788.1 10.0kb downstream 10.0kb downstream 555 false scaffold11773: 1-555 Olea europaea

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479350 5263 Asterids View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain