Gene : Oeu060083.1 O. europaea v1.0
Defline:  (1 of 2) K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Genomic Order:  52
Name:  ? Oeu060083.1 Secondary Identifier:  ? PAC:37722343
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Oeuropaea PWY-7511 Olea europaea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Oeu060083.1 0.5kb upstream 0.5kb upstream 7340 true scaffold83: 1121815-1129154 Olea europaea
Oeu060083.1 0.5kb upstream 0.5kb upstream 500 false scaffold83: 1121815-1122314 Olea europaea
Oeu060083.1 0.5kb downstream 0.5kb downstream 7340 true scaffold83: 1122315-1129654 Olea europaea
Oeu060083.1 0.5kb downstream 0.5kb downstream 500 false scaffold83: 1129155-1129654 Olea europaea
Oeu060083.1 1.0kb upstream 1.0kb upstream 7840 true scaffold83: 1121315-1129154 Olea europaea
Oeu060083.1 1.0kb upstream 1.0kb upstream 1000 false scaffold83: 1121315-1122314 Olea europaea
Oeu060083.1 1.0kb downstream 1.0kb downstream 7840 true scaffold83: 1122315-1130154 Olea europaea
Oeu060083.1 1.0kb downstream 1.0kb downstream 1000 false scaffold83: 1129155-1130154 Olea europaea
Oeu060083.1 2.0kb upstream 2.0kb upstream 8840 true scaffold83: 1120315-1129154 Olea europaea
Oeu060083.1 2.0kb upstream 2.0kb upstream 2000 false scaffold83: 1120315-1122314 Olea europaea
Oeu060083.1 2.0kb downstream 2.0kb downstream 8840 true scaffold83: 1122315-1131154 Olea europaea
Oeu060083.1 2.0kb downstream 2.0kb downstream 2000 false scaffold83: 1129155-1131154 Olea europaea
Oeu060083.1 5.0kb upstream 5.0kb upstream 11840 true scaffold83: 1117315-1129154 Olea europaea
Oeu060083.1 5.0kb upstream 5.0kb upstream 5000 false scaffold83: 1117315-1122314 Olea europaea
Oeu060083.1 5.0kb downstream 5.0kb downstream 11840 true scaffold83: 1122315-1134154 Olea europaea
Oeu060083.1 5.0kb downstream 5.0kb downstream 5000 false scaffold83: 1129155-1134154 Olea europaea
Oeu060083.1 10.0kb upstream 10.0kb upstream 16840 true scaffold83: 1112315-1129154 Olea europaea
Oeu060083.1 10.0kb upstream 10.0kb upstream 10000 false scaffold83: 1112315-1122314 Olea europaea
Oeu060083.1 10.0kb downstream 10.0kb downstream 16840 true scaffold83: 1122315-1139154 Olea europaea
Oeu060083.1 10.0kb downstream 10.0kb downstream 10000 false scaffold83: 1129155-1139154 Olea europaea

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472496 5263 Asterids View MSA
123736938 5271 Pentapetalae View MSA
122796953 5272 Eudicot View MSA
122044351 5273 Angiosperm View MSA
121310283 5274 Embryophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain