Gene : Oeu062858.1 O. europaea v1.0
Defline:  (1 of 9) PTHR30128//PTHR30128:SF8 - OUTER MEMBRANE PROTEIN, OMPA-RELATED // PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1 Genomic Order:  1007
Name:  ? Oeu062858.1 Secondary Identifier:  ? PAC:37727743
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Oeuropaea PHOTOALL-PWY Olea europaea pathologic  
Oeuropaea PWY-101 Olea europaea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Oeu062858.1 0.5kb upstream 0.5kb upstream 4577 true chr1: 18245590-18250166 Olea europaea
Oeu062858.1 0.5kb upstream 0.5kb upstream 500 false chr1: 18245590-18246089 Olea europaea
Oeu062858.1 0.5kb downstream 0.5kb downstream 4577 true chr1: 18246090-18250666 Olea europaea
Oeu062858.1 0.5kb downstream 0.5kb downstream 500 false chr1: 18250167-18250666 Olea europaea
Oeu062858.1 1.0kb upstream 1.0kb upstream 5077 true chr1: 18245090-18250166 Olea europaea
Oeu062858.1 1.0kb upstream 1.0kb upstream 1000 false chr1: 18245090-18246089 Olea europaea
Oeu062858.1 1.0kb downstream 1.0kb downstream 5077 true chr1: 18246090-18251166 Olea europaea
Oeu062858.1 1.0kb downstream 1.0kb downstream 1000 false chr1: 18250167-18251166 Olea europaea
Oeu062858.1 2.0kb upstream 2.0kb upstream 6077 true chr1: 18244090-18250166 Olea europaea
Oeu062858.1 2.0kb upstream 2.0kb upstream 2000 false chr1: 18244090-18246089 Olea europaea
Oeu062858.1 2.0kb downstream 2.0kb downstream 6077 true chr1: 18246090-18252166 Olea europaea
Oeu062858.1 2.0kb downstream 2.0kb downstream 2000 false chr1: 18250167-18252166 Olea europaea
Oeu062858.1 5.0kb upstream 5.0kb upstream 9077 true chr1: 18241090-18250166 Olea europaea
Oeu062858.1 5.0kb upstream 5.0kb upstream 5000 false chr1: 18241090-18246089 Olea europaea
Oeu062858.1 5.0kb downstream 5.0kb downstream 9077 true chr1: 18246090-18255166 Olea europaea
Oeu062858.1 5.0kb downstream 5.0kb downstream 5000 false chr1: 18250167-18255166 Olea europaea
Oeu062858.1 10.0kb upstream 10.0kb upstream 14077 true chr1: 18236090-18250166 Olea europaea
Oeu062858.1 10.0kb upstream 10.0kb upstream 10000 false chr1: 18236090-18246089 Olea europaea
Oeu062858.1 10.0kb downstream 10.0kb downstream 14077 true chr1: 18246090-18260166 Olea europaea
Oeu062858.1 10.0kb downstream 10.0kb downstream 10000 false chr1: 18250167-18260166 Olea europaea

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029302 5273 Angiosperm View MSA
121466937 5263 Asterids View MSA
123736754 5271 Pentapetalae View MSA
122769876 5272 Eudicot View MSA
121350541 5274 Embryophyte View MSA
123381782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain