Gene : 29732.t000009 R. communis v0.1
Defline:  (1 of 7) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  9
Name:  ? 29732.t000009 Secondary Identifier:  ? PAC:16807060
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29732.t000009 0.5kb upstream 0.5kb upstream 3317 true 29732: 54198-57514 Ricinus communis
29732.t000009 0.5kb upstream 0.5kb upstream 500 false 29732: 54198-54697 Ricinus communis
29732.t000009 0.5kb downstream 0.5kb downstream 3317 true 29732: 54698-58014 Ricinus communis
29732.t000009 0.5kb downstream 0.5kb downstream 500 false 29732: 57515-58014 Ricinus communis
29732.t000009 1.0kb upstream 1.0kb upstream 3817 true 29732: 53698-57514 Ricinus communis
29732.t000009 1.0kb upstream 1.0kb upstream 1000 false 29732: 53698-54697 Ricinus communis
29732.t000009 1.0kb downstream 1.0kb downstream 3817 true 29732: 54698-58514 Ricinus communis
29732.t000009 1.0kb downstream 1.0kb downstream 1000 false 29732: 57515-58514 Ricinus communis
29732.t000009 2.0kb upstream 2.0kb upstream 4817 true 29732: 52698-57514 Ricinus communis
29732.t000009 2.0kb upstream 2.0kb upstream 2000 false 29732: 52698-54697 Ricinus communis
29732.t000009 2.0kb downstream 2.0kb downstream 4817 true 29732: 54698-59514 Ricinus communis
29732.t000009 2.0kb downstream 2.0kb downstream 2000 false 29732: 57515-59514 Ricinus communis
29732.t000009 5.0kb upstream 5.0kb upstream 7817 true 29732: 49698-57514 Ricinus communis
29732.t000009 5.0kb upstream 5.0kb upstream 5000 false 29732: 49698-54697 Ricinus communis
29732.t000009 5.0kb downstream 5.0kb downstream 7817 true 29732: 54698-62514 Ricinus communis
29732.t000009 5.0kb downstream 5.0kb downstream 5000 false 29732: 57515-62514 Ricinus communis
29732.t000009 10.0kb upstream 10.0kb upstream 12817 true 29732: 44698-57514 Ricinus communis
29732.t000009 10.0kb upstream 10.0kb upstream 10000 false 29732: 44698-54697 Ricinus communis
29732.t000009 10.0kb downstream 10.0kb downstream 12817 true 29732: 54698-67514 Ricinus communis
29732.t000009 10.0kb downstream 10.0kb downstream 10000 false 29732: 57515-67514 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426544 5262 Malpighiales View MSA
124248769 5268 Malvidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain