Gene : 29785.t000004 R. communis v0.1
Defline:  (1 of 8) K02703 - photosystem II P680 reaction center D1 protein (psbA) Genomic Order:  4
Name:  ? 29785.t000004 Secondary Identifier:  ? PAC:16808481
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PHOTOALL-PWY Ricinus communis pathologic  
Rcommunis PWY-101 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29785.t000004 0.5kb upstream 0.5kb upstream 1562 true 29785: 51888-53449 Ricinus communis
29785.t000004 0.5kb upstream 0.5kb upstream 500 false 29785: 51888-52387 Ricinus communis
29785.t000004 0.5kb downstream 0.5kb downstream 1562 true 29785: 52388-53949 Ricinus communis
29785.t000004 0.5kb downstream 0.5kb downstream 500 false 29785: 53450-53949 Ricinus communis
29785.t000004 1.0kb upstream 1.0kb upstream 2062 true 29785: 51388-53449 Ricinus communis
29785.t000004 1.0kb upstream 1.0kb upstream 1000 false 29785: 51388-52387 Ricinus communis
29785.t000004 1.0kb downstream 1.0kb downstream 2062 true 29785: 52388-54449 Ricinus communis
29785.t000004 1.0kb downstream 1.0kb downstream 1000 false 29785: 53450-54449 Ricinus communis
29785.t000004 2.0kb upstream 2.0kb upstream 3062 true 29785: 50388-53449 Ricinus communis
29785.t000004 2.0kb upstream 2.0kb upstream 2000 false 29785: 50388-52387 Ricinus communis
29785.t000004 2.0kb downstream 2.0kb downstream 3062 true 29785: 52388-55449 Ricinus communis
29785.t000004 2.0kb downstream 2.0kb downstream 2000 false 29785: 53450-55449 Ricinus communis
29785.t000004 5.0kb upstream 5.0kb upstream 6062 true 29785: 47388-53449 Ricinus communis
29785.t000004 5.0kb upstream 5.0kb upstream 5000 false 29785: 47388-52387 Ricinus communis
29785.t000004 5.0kb downstream 5.0kb downstream 6062 true 29785: 52388-58449 Ricinus communis
29785.t000004 5.0kb downstream 5.0kb downstream 5000 false 29785: 53450-58449 Ricinus communis
29785.t000004 10.0kb upstream 10.0kb upstream 11062 true 29785: 42388-53449 Ricinus communis
29785.t000004 10.0kb upstream 10.0kb upstream 10000 false 29785: 42388-52387 Ricinus communis
29785.t000004 10.0kb downstream 10.0kb downstream 11062 true 29785: 52388-63449 Ricinus communis
29785.t000004 10.0kb downstream 10.0kb downstream 10000 false 29785: 53450-63449 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457552 5262 Malpighiales View MSA
124254176 5268 Malvidae View MSA
124074858 5270 Rosid View MSA
123753555 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain