Gene : 29841.t000089 R. communis v0.1
Defline:  (1 of 41) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  86
Name:  ? 29841.t000089 Secondary Identifier:  ? PAC:16810538
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-1081 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29841.t000089 0.5kb upstream 0.5kb upstream 3330 true 29841: 538328-541657 Ricinus communis
29841.t000089 0.5kb upstream 0.5kb upstream 500 false 29841: 538328-538827 Ricinus communis
29841.t000089 0.5kb downstream 0.5kb downstream 3330 true 29841: 538828-542157 Ricinus communis
29841.t000089 0.5kb downstream 0.5kb downstream 500 false 29841: 541658-542157 Ricinus communis
29841.t000089 1.0kb upstream 1.0kb upstream 3830 true 29841: 537828-541657 Ricinus communis
29841.t000089 1.0kb upstream 1.0kb upstream 1000 false 29841: 537828-538827 Ricinus communis
29841.t000089 1.0kb downstream 1.0kb downstream 3830 true 29841: 538828-542657 Ricinus communis
29841.t000089 1.0kb downstream 1.0kb downstream 1000 false 29841: 541658-542657 Ricinus communis
29841.t000089 2.0kb upstream 2.0kb upstream 4830 true 29841: 536828-541657 Ricinus communis
29841.t000089 2.0kb upstream 2.0kb upstream 2000 false 29841: 536828-538827 Ricinus communis
29841.t000089 2.0kb downstream 2.0kb downstream 4830 true 29841: 538828-543657 Ricinus communis
29841.t000089 2.0kb downstream 2.0kb downstream 2000 false 29841: 541658-543657 Ricinus communis
29841.t000089 5.0kb upstream 5.0kb upstream 7830 true 29841: 533828-541657 Ricinus communis
29841.t000089 5.0kb upstream 5.0kb upstream 5000 false 29841: 533828-538827 Ricinus communis
29841.t000089 5.0kb downstream 5.0kb downstream 7830 true 29841: 538828-546657 Ricinus communis
29841.t000089 5.0kb downstream 5.0kb downstream 5000 false 29841: 541658-546657 Ricinus communis
29841.t000089 10.0kb upstream 10.0kb upstream 12830 true 29841: 528828-541657 Ricinus communis
29841.t000089 10.0kb upstream 10.0kb upstream 10000 false 29841: 528828-538827 Ricinus communis
29841.t000089 10.0kb downstream 10.0kb downstream 12830 true 29841: 538828-551657 Ricinus communis
29841.t000089 10.0kb downstream 10.0kb downstream 10000 false 29841: 541658-551657 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456407 5262 Malpighiales View MSA
124254286 5268 Malvidae View MSA
124062237 5270 Rosid View MSA
123747899 5271 Pentapetalae View MSA
122789338 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain