Gene : 29883.t000098 R. communis v0.1
Defline:  (1 of 1) PTHR11451:SF5 - THREONINE--TRNA LIGASE 1, CYTOPLASMIC-RELATED Genomic Order:  97
Name:  ? 29883.t000098 Secondary Identifier:  ? PAC:16812130
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis TRNA-CHARGING-PWY Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29883.t000098 0.5kb upstream 0.5kb upstream 12053 true 29883: 708473-720525 Ricinus communis
29883.t000098 0.5kb upstream 0.5kb upstream 500 false 29883: 708473-708972 Ricinus communis
29883.t000098 0.5kb downstream 0.5kb downstream 12053 true 29883: 708973-721025 Ricinus communis
29883.t000098 0.5kb downstream 0.5kb downstream 500 false 29883: 720526-721025 Ricinus communis
29883.t000098 1.0kb upstream 1.0kb upstream 12553 true 29883: 707973-720525 Ricinus communis
29883.t000098 1.0kb upstream 1.0kb upstream 1000 false 29883: 707973-708972 Ricinus communis
29883.t000098 1.0kb downstream 1.0kb downstream 12553 true 29883: 708973-721525 Ricinus communis
29883.t000098 1.0kb downstream 1.0kb downstream 1000 false 29883: 720526-721525 Ricinus communis
29883.t000098 2.0kb upstream 2.0kb upstream 13553 true 29883: 706973-720525 Ricinus communis
29883.t000098 2.0kb upstream 2.0kb upstream 2000 false 29883: 706973-708972 Ricinus communis
29883.t000098 2.0kb downstream 2.0kb downstream 13553 true 29883: 708973-722525 Ricinus communis
29883.t000098 2.0kb downstream 2.0kb downstream 2000 false 29883: 720526-722525 Ricinus communis
29883.t000098 5.0kb upstream 5.0kb upstream 16553 true 29883: 703973-720525 Ricinus communis
29883.t000098 5.0kb upstream 5.0kb upstream 5000 false 29883: 703973-708972 Ricinus communis
29883.t000098 5.0kb downstream 5.0kb downstream 16553 true 29883: 708973-725525 Ricinus communis
29883.t000098 5.0kb downstream 5.0kb downstream 5000 false 29883: 720526-725525 Ricinus communis
29883.t000098 10.0kb upstream 10.0kb upstream 21553 true 29883: 698973-720525 Ricinus communis
29883.t000098 10.0kb upstream 10.0kb upstream 10000 false 29883: 698973-708972 Ricinus communis
29883.t000098 10.0kb downstream 10.0kb downstream 21553 true 29883: 708973-730525 Ricinus communis
29883.t000098 10.0kb downstream 10.0kb downstream 10000 false 29883: 720526-730525 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453069 5262 Malpighiales View MSA
124249574 5268 Malvidae View MSA
124061778 5270 Rosid View MSA
123740183 5271 Pentapetalae View MSA
122787371 5272 Eudicot View MSA
122045647 5273 Angiosperm View MSA
123429084 5275 Viridiplantae View MSA
121345438 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain