Gene : 29889.t000128 R. communis v0.1
Defline:  (1 of 41) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  126
Name:  ? 29889.t000128 Secondary Identifier:  ? PAC:16812308
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-1081 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29889.t000128 0.5kb upstream 0.5kb upstream 2622 true 29889: 674635-677256 Ricinus communis
29889.t000128 0.5kb upstream 0.5kb upstream 500 false 29889: 674635-675134 Ricinus communis
29889.t000128 0.5kb downstream 0.5kb downstream 2622 true 29889: 675135-677756 Ricinus communis
29889.t000128 0.5kb downstream 0.5kb downstream 500 false 29889: 677257-677756 Ricinus communis
29889.t000128 1.0kb upstream 1.0kb upstream 3122 true 29889: 674135-677256 Ricinus communis
29889.t000128 1.0kb upstream 1.0kb upstream 1000 false 29889: 674135-675134 Ricinus communis
29889.t000128 1.0kb downstream 1.0kb downstream 3122 true 29889: 675135-678256 Ricinus communis
29889.t000128 1.0kb downstream 1.0kb downstream 1000 false 29889: 677257-678256 Ricinus communis
29889.t000128 2.0kb upstream 2.0kb upstream 4122 true 29889: 673135-677256 Ricinus communis
29889.t000128 2.0kb upstream 2.0kb upstream 2000 false 29889: 673135-675134 Ricinus communis
29889.t000128 2.0kb downstream 2.0kb downstream 4122 true 29889: 675135-679256 Ricinus communis
29889.t000128 2.0kb downstream 2.0kb downstream 2000 false 29889: 677257-679256 Ricinus communis
29889.t000128 5.0kb upstream 5.0kb upstream 7122 true 29889: 670135-677256 Ricinus communis
29889.t000128 5.0kb upstream 5.0kb upstream 5000 false 29889: 670135-675134 Ricinus communis
29889.t000128 5.0kb downstream 5.0kb downstream 7122 true 29889: 675135-682256 Ricinus communis
29889.t000128 5.0kb downstream 5.0kb downstream 5000 false 29889: 677257-682256 Ricinus communis
29889.t000128 10.0kb upstream 10.0kb upstream 12122 true 29889: 665135-677256 Ricinus communis
29889.t000128 10.0kb upstream 10.0kb upstream 10000 false 29889: 665135-675134 Ricinus communis
29889.t000128 10.0kb downstream 10.0kb downstream 12122 true 29889: 675135-687256 Ricinus communis
29889.t000128 10.0kb downstream 10.0kb downstream 10000 false 29889: 677257-687256 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451982 5262 Malpighiales View MSA
124242051 5268 Malvidae View MSA
124065487 5270 Rosid View MSA
123736627 5271 Pentapetalae View MSA
122795582 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain