Gene : Sobic.008G109900 S. bicolor v3.1.1
Defline:  (1 of 1) PF15811 - Small VCP/p97-interacting protein (SVIP) Genomic Order:  1160
Name:  ? Sobic.008G109900 Secondary Identifier:  ? PAC:37927576
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G109900 0.5kb upstream 0.5kb upstream 2552   true Chr08: 51045549-51048100 Sorghum bicolor
Sobic.008G109900 0.5kb upstream 0.5kb upstream 500   false Chr08: 51047601-51048100 Sorghum bicolor
Sobic.008G109900 0.5kb downstream 0.5kb downstream 2552   true Chr08: 51045049-51047600 Sorghum bicolor
Sobic.008G109900 0.5kb downstream 0.5kb downstream 500   false Chr08: 51045049-51045548 Sorghum bicolor
Sobic.008G109900 1.0kb upstream 1.0kb upstream 3052   true Chr08: 51045549-51048600 Sorghum bicolor
Sobic.008G109900 1.0kb upstream 1.0kb upstream 1000   false Chr08: 51047601-51048600 Sorghum bicolor
Sobic.008G109900 1.0kb downstream 1.0kb downstream 3052   true Chr08: 51044549-51047600 Sorghum bicolor
Sobic.008G109900 1.0kb downstream 1.0kb downstream 1000   false Chr08: 51044549-51045548 Sorghum bicolor
Sobic.008G109900 2.0kb upstream 2.0kb upstream 4052   true Chr08: 51045549-51049600 Sorghum bicolor
Sobic.008G109900 2.0kb upstream 2.0kb upstream 2000   false Chr08: 51047601-51049600 Sorghum bicolor
Sobic.008G109900 2.0kb downstream 2.0kb downstream 4052   true Chr08: 51043549-51047600 Sorghum bicolor
Sobic.008G109900 2.0kb downstream 2.0kb downstream 2000   false Chr08: 51043549-51045548 Sorghum bicolor
Sobic.008G109900 5.0kb upstream 5.0kb upstream 7052   true Chr08: 51045549-51052600 Sorghum bicolor
Sobic.008G109900 5.0kb upstream 5.0kb upstream 5000   false Chr08: 51047601-51052600 Sorghum bicolor
Sobic.008G109900 5.0kb downstream 5.0kb downstream 7052   true Chr08: 51040549-51047600 Sorghum bicolor
Sobic.008G109900 5.0kb downstream 5.0kb downstream 5000   false Chr08: 51040549-51045548 Sorghum bicolor
Sobic.008G109900 10.0kb upstream 10.0kb upstream 12052   true Chr08: 51045549-51057600 Sorghum bicolor
Sobic.008G109900 10.0kb upstream 10.0kb upstream 10000   false Chr08: 51047601-51057600 Sorghum bicolor
Sobic.008G109900 10.0kb downstream 10.0kb downstream 12052   true Chr08: 51035549-51047600 Sorghum bicolor
Sobic.008G109900 10.0kb downstream 10.0kb downstream 10000   false Chr08: 51035549-51045548 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571797 5269 Grass View MSA
122183078 5267 Panicoideae View MSA
122050042 5273 Angiosperm View MSA
121311703 5274 Embryophyte View MSA
123348966 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.282        
cufflinks 4.525        
cufflinks 3.229        
cufflinks 7.494       High
cufflinks 2.106       Low
cufflinks 10.095       High
cufflinks 9.772       High
cufflinks 5.311        
cufflinks 4.337        
cufflinks 4.411        
cufflinks 9.792       High
cufflinks 4.817        
cufflinks 3.997        
cufflinks 6.381        
cufflinks 4.322        
cufflinks 3.465        
cufflinks 10.803       High
cufflinks 8.484       High
cufflinks 2.275       Low
cufflinks 4.108        
cufflinks 3.293        
cufflinks 6.123        
cufflinks 8.391       High
cufflinks 6.959        
cufflinks 7.05        
cufflinks 4.054        
cufflinks 4.913        
cufflinks 3.018        
cufflinks 6.035        
cufflinks 3.116        

0 Strain