Gene : Sobic.010G097000 S. bicolor v3.1.1
Defline:  (1 of 61) PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Genomic Order:  1007
Name:  ? Sobic.010G097000 Secondary Identifier:  ? PAC:37908685
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G097000 0.5kb upstream 0.5kb upstream 2650   true Chr10: 8736912-8739561 Sorghum bicolor
Sobic.010G097000 0.5kb upstream 0.5kb upstream 500   false Chr10: 8736912-8737411 Sorghum bicolor
Sobic.010G097000 0.5kb downstream 0.5kb downstream 2650   true Chr10: 8737412-8740061 Sorghum bicolor
Sobic.010G097000 0.5kb downstream 0.5kb downstream 500   false Chr10: 8739562-8740061 Sorghum bicolor
Sobic.010G097000 1.0kb upstream 1.0kb upstream 3150   true Chr10: 8736412-8739561 Sorghum bicolor
Sobic.010G097000 1.0kb upstream 1.0kb upstream 1000   false Chr10: 8736412-8737411 Sorghum bicolor
Sobic.010G097000 1.0kb downstream 1.0kb downstream 3150   true Chr10: 8737412-8740561 Sorghum bicolor
Sobic.010G097000 1.0kb downstream 1.0kb downstream 1000   false Chr10: 8739562-8740561 Sorghum bicolor
Sobic.010G097000 2.0kb upstream 2.0kb upstream 4150   true Chr10: 8735412-8739561 Sorghum bicolor
Sobic.010G097000 2.0kb upstream 2.0kb upstream 2000   false Chr10: 8735412-8737411 Sorghum bicolor
Sobic.010G097000 2.0kb downstream 2.0kb downstream 4150   true Chr10: 8737412-8741561 Sorghum bicolor
Sobic.010G097000 2.0kb downstream 2.0kb downstream 2000   false Chr10: 8739562-8741561 Sorghum bicolor
Sobic.010G097000 5.0kb upstream 5.0kb upstream 7150   true Chr10: 8732412-8739561 Sorghum bicolor
Sobic.010G097000 5.0kb upstream 5.0kb upstream 5000   false Chr10: 8732412-8737411 Sorghum bicolor
Sobic.010G097000 5.0kb downstream 5.0kb downstream 7150   true Chr10: 8737412-8744561 Sorghum bicolor
Sobic.010G097000 5.0kb downstream 5.0kb downstream 5000   false Chr10: 8739562-8744561 Sorghum bicolor
Sobic.010G097000 10.0kb upstream 10.0kb upstream 12150   true Chr10: 8727412-8739561 Sorghum bicolor
Sobic.010G097000 10.0kb upstream 10.0kb upstream 10000   false Chr10: 8727412-8737411 Sorghum bicolor
Sobic.010G097000 10.0kb downstream 10.0kb downstream 12150   true Chr10: 8737412-8749561 Sorghum bicolor
Sobic.010G097000 10.0kb downstream 10.0kb downstream 10000   false Chr10: 8739562-8749561 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176746 5267 Panicoideae View MSA
124586216 5269 Grass View MSA
122044387 5273 Angiosperm View MSA
121310287 5274 Embryophyte View MSA
123347814 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.344       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low Low
cufflinks 0.024     Low  
cufflinks 0.959       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.253        
cufflinks 0.066        
cufflinks 0.065     Low  
cufflinks 0.07     Low  
cufflinks 0.033     Low  
cufflinks 0.021     Low  
cufflinks 0.104        
cufflinks 0.015     Low Low
cufflinks 0.038     Low  
cufflinks 0.027     Low  
cufflinks 0.215        
cufflinks 0.232        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.235        
cufflinks 0.669       High
cufflinks 0.022     Low  
cufflinks 0.014     Low Low
cufflinks 0.014     Low Low
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.08        
cufflinks 0.122        
cufflinks 0.276       High

0 Strain