Gene : Sobic.010G096700 S. bicolor v3.1.1
Defline:  (1 of 61) PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Genomic Order:  1004
Name:  ? Sobic.010G096700 Secondary Identifier:  ? PAC:37909669
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G096700 0.5kb upstream 0.5kb upstream 2215   true Chr10: 8716250-8718464 Sorghum bicolor
Sobic.010G096700 0.5kb upstream 0.5kb upstream 500   false Chr10: 8717965-8718464 Sorghum bicolor
Sobic.010G096700 0.5kb downstream 0.5kb downstream 2215   true Chr10: 8715750-8717964 Sorghum bicolor
Sobic.010G096700 0.5kb downstream 0.5kb downstream 500   false Chr10: 8715750-8716249 Sorghum bicolor
Sobic.010G096700 1.0kb upstream 1.0kb upstream 2715   true Chr10: 8716250-8718964 Sorghum bicolor
Sobic.010G096700 1.0kb upstream 1.0kb upstream 1000   false Chr10: 8717965-8718964 Sorghum bicolor
Sobic.010G096700 1.0kb downstream 1.0kb downstream 2715   true Chr10: 8715250-8717964 Sorghum bicolor
Sobic.010G096700 1.0kb downstream 1.0kb downstream 1000   false Chr10: 8715250-8716249 Sorghum bicolor
Sobic.010G096700 2.0kb upstream 2.0kb upstream 3715   true Chr10: 8716250-8719964 Sorghum bicolor
Sobic.010G096700 2.0kb upstream 2.0kb upstream 2000   false Chr10: 8717965-8719964 Sorghum bicolor
Sobic.010G096700 2.0kb downstream 2.0kb downstream 3715   true Chr10: 8714250-8717964 Sorghum bicolor
Sobic.010G096700 2.0kb downstream 2.0kb downstream 2000   false Chr10: 8714250-8716249 Sorghum bicolor
Sobic.010G096700 5.0kb upstream 5.0kb upstream 6715   true Chr10: 8716250-8722964 Sorghum bicolor
Sobic.010G096700 5.0kb upstream 5.0kb upstream 5000   false Chr10: 8717965-8722964 Sorghum bicolor
Sobic.010G096700 5.0kb downstream 5.0kb downstream 6715   true Chr10: 8711250-8717964 Sorghum bicolor
Sobic.010G096700 5.0kb downstream 5.0kb downstream 5000   false Chr10: 8711250-8716249 Sorghum bicolor
Sobic.010G096700 10.0kb upstream 10.0kb upstream 11715   true Chr10: 8716250-8727964 Sorghum bicolor
Sobic.010G096700 10.0kb upstream 10.0kb upstream 10000   false Chr10: 8717965-8727964 Sorghum bicolor
Sobic.010G096700 10.0kb downstream 10.0kb downstream 11715   true Chr10: 8706250-8717964 Sorghum bicolor
Sobic.010G096700 10.0kb downstream 10.0kb downstream 10000   false Chr10: 8706250-8716249 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030324 5273 Angiosperm View MSA
122185301 5267 Panicoideae View MSA
124586698 5269 Grass View MSA
121299513 5274 Embryophyte View MSA
123337376 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.388        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.092     Low  
cufflinks 0.011     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.477       High
cufflinks 1.482        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.539        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.045     Low  
cufflinks 0.052     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.055     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.352        
cufflinks 1.723        
cufflinks 1.862        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.193        
cufflinks 0.04     Low  
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain