Gene : Sobic.008G111700 S. bicolor v3.1.1
Defline:  (1 of 9) PF00536 - SAM domain (Sterile alpha motif) (SAM_1) Genomic Order:  1183
Name:  ? Sobic.008G111700 Secondary Identifier:  ? PAC:37928739
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G111700 0.5kb upstream 0.5kb upstream 6092   true Chr08: 51730386-51736477 Sorghum bicolor
Sobic.008G111700 0.5kb upstream 0.5kb upstream 500   false Chr08: 51735978-51736477 Sorghum bicolor
Sobic.008G111700 0.5kb downstream 0.5kb downstream 6092   true Chr08: 51729886-51735977 Sorghum bicolor
Sobic.008G111700 0.5kb downstream 0.5kb downstream 500   false Chr08: 51729886-51730385 Sorghum bicolor
Sobic.008G111700 1.0kb upstream 1.0kb upstream 6592   true Chr08: 51730386-51736977 Sorghum bicolor
Sobic.008G111700 1.0kb upstream 1.0kb upstream 1000   false Chr08: 51735978-51736977 Sorghum bicolor
Sobic.008G111700 1.0kb downstream 1.0kb downstream 6592   true Chr08: 51729386-51735977 Sorghum bicolor
Sobic.008G111700 1.0kb downstream 1.0kb downstream 1000   false Chr08: 51729386-51730385 Sorghum bicolor
Sobic.008G111700 2.0kb upstream 2.0kb upstream 7592   true Chr08: 51730386-51737977 Sorghum bicolor
Sobic.008G111700 2.0kb upstream 2.0kb upstream 2000   false Chr08: 51735978-51737977 Sorghum bicolor
Sobic.008G111700 2.0kb downstream 2.0kb downstream 7592   true Chr08: 51728386-51735977 Sorghum bicolor
Sobic.008G111700 2.0kb downstream 2.0kb downstream 2000   false Chr08: 51728386-51730385 Sorghum bicolor
Sobic.008G111700 5.0kb upstream 5.0kb upstream 10592   true Chr08: 51730386-51740977 Sorghum bicolor
Sobic.008G111700 5.0kb upstream 5.0kb upstream 5000   false Chr08: 51735978-51740977 Sorghum bicolor
Sobic.008G111700 5.0kb downstream 5.0kb downstream 10592   true Chr08: 51725386-51735977 Sorghum bicolor
Sobic.008G111700 5.0kb downstream 5.0kb downstream 5000   false Chr08: 51725386-51730385 Sorghum bicolor
Sobic.008G111700 10.0kb upstream 10.0kb upstream 15592   true Chr08: 51730386-51745977 Sorghum bicolor
Sobic.008G111700 10.0kb upstream 10.0kb upstream 10000   false Chr08: 51735978-51745977 Sorghum bicolor
Sobic.008G111700 10.0kb downstream 10.0kb downstream 15592   true Chr08: 51720386-51735977 Sorghum bicolor
Sobic.008G111700 10.0kb downstream 10.0kb downstream 10000   false Chr08: 51720386-51730385 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183997 5267 Panicoideae View MSA
124587072 5269 Grass View MSA
122050384 5273 Angiosperm View MSA
121345034 5274 Embryophyte View MSA
123380141 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.514        
cufflinks 1.276       Low
cufflinks 2.464       Low
cufflinks 4.41        
cufflinks 5.561        
cufflinks 4.844        
cufflinks 4.414        
cufflinks 2.286       Low
cufflinks 6.32        
cufflinks 6.177        
cufflinks 3.282        
cufflinks 4.693        
cufflinks 5.673        
cufflinks 4.939        
cufflinks 4.813        
cufflinks 2.851        
cufflinks 4.968        
cufflinks 4.136        
cufflinks 2.497       Low
cufflinks 5.871        
cufflinks 6.906       High
cufflinks 4.214        
cufflinks 4.7        
cufflinks 4.804        
cufflinks 2.507       Low
cufflinks 1.266       Low
cufflinks 3.443        
cufflinks 19.19     High High
cufflinks 3.147        
cufflinks 4.676        

0 Strain