Gene : Sobic.008G116400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR20863//PTHR20863:SF29 - ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED // ACYL CARRIER PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  1229
Name:  ? Sobic.008G116400 Secondary Identifier:  ? PAC:37927997
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G116400 0.5kb upstream 0.5kb upstream 3577   true Chr08: 52643796-52647372 Sorghum bicolor
Sobic.008G116400 0.5kb upstream 0.5kb upstream 500   false Chr08: 52646873-52647372 Sorghum bicolor
Sobic.008G116400 0.5kb downstream 0.5kb downstream 3577   true Chr08: 52643296-52646872 Sorghum bicolor
Sobic.008G116400 0.5kb downstream 0.5kb downstream 500   false Chr08: 52643296-52643795 Sorghum bicolor
Sobic.008G116400 1.0kb upstream 1.0kb upstream 4077   true Chr08: 52643796-52647872 Sorghum bicolor
Sobic.008G116400 1.0kb upstream 1.0kb upstream 1000   false Chr08: 52646873-52647872 Sorghum bicolor
Sobic.008G116400 1.0kb downstream 1.0kb downstream 4077   true Chr08: 52642796-52646872 Sorghum bicolor
Sobic.008G116400 1.0kb downstream 1.0kb downstream 1000   false Chr08: 52642796-52643795 Sorghum bicolor
Sobic.008G116400 2.0kb upstream 2.0kb upstream 5077   true Chr08: 52643796-52648872 Sorghum bicolor
Sobic.008G116400 2.0kb upstream 2.0kb upstream 2000   false Chr08: 52646873-52648872 Sorghum bicolor
Sobic.008G116400 2.0kb downstream 2.0kb downstream 5077   true Chr08: 52641796-52646872 Sorghum bicolor
Sobic.008G116400 2.0kb downstream 2.0kb downstream 2000   false Chr08: 52641796-52643795 Sorghum bicolor
Sobic.008G116400 5.0kb upstream 5.0kb upstream 8077   true Chr08: 52643796-52651872 Sorghum bicolor
Sobic.008G116400 5.0kb upstream 5.0kb upstream 5000   false Chr08: 52646873-52651872 Sorghum bicolor
Sobic.008G116400 5.0kb downstream 5.0kb downstream 8077   true Chr08: 52638796-52646872 Sorghum bicolor
Sobic.008G116400 5.0kb downstream 5.0kb downstream 5000   false Chr08: 52638796-52643795 Sorghum bicolor
Sobic.008G116400 10.0kb upstream 10.0kb upstream 13077   true Chr08: 52643796-52656872 Sorghum bicolor
Sobic.008G116400 10.0kb upstream 10.0kb upstream 10000   false Chr08: 52646873-52656872 Sorghum bicolor
Sobic.008G116400 10.0kb downstream 10.0kb downstream 13077   true Chr08: 52633796-52646872 Sorghum bicolor
Sobic.008G116400 10.0kb downstream 10.0kb downstream 10000   false Chr08: 52633796-52643795 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180055 5267 Panicoideae View MSA
124573366 5269 Grass View MSA
122049325 5273 Angiosperm View MSA
121348515 5274 Embryophyte View MSA
123428029 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.855     High  
cufflinks 3.686       Low
cufflinks 4.76        
cufflinks 4.033       Low
cufflinks 9.366        
cufflinks 5.104        
cufflinks 18.16     High High
cufflinks 23.819     High High
cufflinks 3.741       Low
cufflinks 4.211       Low
cufflinks 16.347     High  
cufflinks 9.083        
cufflinks 4.069       Low
cufflinks 10.81        
cufflinks 6.226        
cufflinks 5.639        
cufflinks 17.556     High  
cufflinks 25.164     High High
cufflinks 5.021        
cufflinks 6.317        
cufflinks 8.247        
cufflinks 21.382     High High
cufflinks 13.194     High  
cufflinks 14.182     High  
cufflinks 2.453       Low
cufflinks 5.681        
cufflinks 4.882        
cufflinks 3.206       Low
cufflinks 48.694     High High
cufflinks 5.51        

0 Strain