Gene : Sobic.008G116700 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR15117 - ATAXIN 7 RELATED Genomic Order:  1232
Name:  ? Sobic.008G116700 Secondary Identifier:  ? PAC:37927455
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G116700 0.5kb upstream 0.5kb upstream 9589   true Chr08: 52655986-52665574 Sorghum bicolor
Sobic.008G116700 0.5kb upstream 0.5kb upstream 500   false Chr08: 52655986-52656485 Sorghum bicolor
Sobic.008G116700 0.5kb downstream 0.5kb downstream 9589   true Chr08: 52656486-52666074 Sorghum bicolor
Sobic.008G116700 0.5kb downstream 0.5kb downstream 500   false Chr08: 52665575-52666074 Sorghum bicolor
Sobic.008G116700 1.0kb upstream 1.0kb upstream 10089   true Chr08: 52655486-52665574 Sorghum bicolor
Sobic.008G116700 1.0kb upstream 1.0kb upstream 1000   false Chr08: 52655486-52656485 Sorghum bicolor
Sobic.008G116700 1.0kb downstream 1.0kb downstream 10089   true Chr08: 52656486-52666574 Sorghum bicolor
Sobic.008G116700 1.0kb downstream 1.0kb downstream 1000   false Chr08: 52665575-52666574 Sorghum bicolor
Sobic.008G116700 2.0kb upstream 2.0kb upstream 11089   true Chr08: 52654486-52665574 Sorghum bicolor
Sobic.008G116700 2.0kb upstream 2.0kb upstream 2000   false Chr08: 52654486-52656485 Sorghum bicolor
Sobic.008G116700 2.0kb downstream 2.0kb downstream 11089   true Chr08: 52656486-52667574 Sorghum bicolor
Sobic.008G116700 2.0kb downstream 2.0kb downstream 2000   false Chr08: 52665575-52667574 Sorghum bicolor
Sobic.008G116700 5.0kb upstream 5.0kb upstream 14089   true Chr08: 52651486-52665574 Sorghum bicolor
Sobic.008G116700 5.0kb upstream 5.0kb upstream 5000   false Chr08: 52651486-52656485 Sorghum bicolor
Sobic.008G116700 5.0kb downstream 5.0kb downstream 14089   true Chr08: 52656486-52670574 Sorghum bicolor
Sobic.008G116700 5.0kb downstream 5.0kb downstream 5000   false Chr08: 52665575-52670574 Sorghum bicolor
Sobic.008G116700 10.0kb upstream 10.0kb upstream 19089   true Chr08: 52646486-52665574 Sorghum bicolor
Sobic.008G116700 10.0kb upstream 10.0kb upstream 10000   false Chr08: 52646486-52656485 Sorghum bicolor
Sobic.008G116700 10.0kb downstream 10.0kb downstream 19089   true Chr08: 52656486-52675574 Sorghum bicolor
Sobic.008G116700 10.0kb downstream 10.0kb downstream 10000   false Chr08: 52665575-52675574 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193623 5267 Panicoideae View MSA
124577991 5269 Grass View MSA
122048179 5273 Angiosperm View MSA
121348263 5274 Embryophyte View MSA
123380797 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.655       Low
cufflinks 2.046        
cufflinks 3.121       High
cufflinks 2.668        
cufflinks 2.152        
cufflinks 4.109       High
cufflinks 1.725        
cufflinks 1.609        
cufflinks 2.853        
cufflinks 2.953        
cufflinks 1.543        
cufflinks 1.673        
cufflinks 3.251       High
cufflinks 1.511        
cufflinks 4.399       High
cufflinks 2.451        
cufflinks 1.498        
cufflinks 1.961        
cufflinks 2.384        
cufflinks 1.904        
cufflinks 2.282        
cufflinks 1.561        
cufflinks 1.497        
cufflinks 1.513        
cufflinks 2.651        
cufflinks 2.08        
cufflinks 2.027        
cufflinks 1.86        
cufflinks 1.782        
cufflinks 3.468       High

0 Strain