Gene : Sobic.010G086300 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR24078:SF247 - CHAPERONE PROTEIN DNAJ 1, MITOCHONDRIAL Genomic Order:  890
Name:  ? Sobic.010G086300 Secondary Identifier:  ? PAC:37908732
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G086300 0.5kb upstream 0.5kb upstream 11134   true Chr10: 7417079-7428212 Sorghum bicolor
Sobic.010G086300 0.5kb upstream 0.5kb upstream 500   false Chr10: 7427713-7428212 Sorghum bicolor
Sobic.010G086300 0.5kb downstream 0.5kb downstream 11134   true Chr10: 7416579-7427712 Sorghum bicolor
Sobic.010G086300 0.5kb downstream 0.5kb downstream 500   false Chr10: 7416579-7417078 Sorghum bicolor
Sobic.010G086300 1.0kb upstream 1.0kb upstream 11634   true Chr10: 7417079-7428712 Sorghum bicolor
Sobic.010G086300 1.0kb upstream 1.0kb upstream 1000   false Chr10: 7427713-7428712 Sorghum bicolor
Sobic.010G086300 1.0kb downstream 1.0kb downstream 11634   true Chr10: 7416079-7427712 Sorghum bicolor
Sobic.010G086300 1.0kb downstream 1.0kb downstream 1000   false Chr10: 7416079-7417078 Sorghum bicolor
Sobic.010G086300 2.0kb upstream 2.0kb upstream 12634   true Chr10: 7417079-7429712 Sorghum bicolor
Sobic.010G086300 2.0kb upstream 2.0kb upstream 2000   false Chr10: 7427713-7429712 Sorghum bicolor
Sobic.010G086300 2.0kb downstream 2.0kb downstream 12634   true Chr10: 7415079-7427712 Sorghum bicolor
Sobic.010G086300 2.0kb downstream 2.0kb downstream 2000   false Chr10: 7415079-7417078 Sorghum bicolor
Sobic.010G086300 5.0kb upstream 5.0kb upstream 15634   true Chr10: 7417079-7432712 Sorghum bicolor
Sobic.010G086300 5.0kb upstream 5.0kb upstream 5000   false Chr10: 7427713-7432712 Sorghum bicolor
Sobic.010G086300 5.0kb downstream 5.0kb downstream 15634   true Chr10: 7412079-7427712 Sorghum bicolor
Sobic.010G086300 5.0kb downstream 5.0kb downstream 5000   false Chr10: 7412079-7417078 Sorghum bicolor
Sobic.010G086300 10.0kb upstream 10.0kb upstream 20634   true Chr10: 7417079-7437712 Sorghum bicolor
Sobic.010G086300 10.0kb upstream 10.0kb upstream 10000   false Chr10: 7427713-7437712 Sorghum bicolor
Sobic.010G086300 10.0kb downstream 10.0kb downstream 20634   true Chr10: 7407079-7427712 Sorghum bicolor
Sobic.010G086300 10.0kb downstream 10.0kb downstream 10000   false Chr10: 7407079-7417078 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187945 5267 Panicoideae View MSA
124585536 5269 Grass View MSA
122049089 5273 Angiosperm View MSA
123429128 5275 Viridiplantae View MSA
121311242 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.673        
cufflinks 0.031     Low Low
cufflinks 0.181        
cufflinks 0.352        
cufflinks 0.706        
cufflinks 0.373        
cufflinks 0.33        
cufflinks 0.126       Low
cufflinks 0.481        
cufflinks 0.523        
cufflinks 0.601        
cufflinks 0.714        
cufflinks 0.305        
cufflinks 0.713        
cufflinks 0.393        
cufflinks 0.095       Low
cufflinks 0.34        
cufflinks 0.354        
cufflinks 0.077     Low Low
cufflinks 0.366        
cufflinks 0.861       High
cufflinks 0.751        
cufflinks 0.73        
cufflinks 0.635        
cufflinks 0.124       Low
cufflinks 0.049       Low
cufflinks 0.522        
cufflinks 0.323        
cufflinks 0.257        
cufflinks 0.672        

0 Strain