Gene : Sobic.008G123400 S. bicolor v3.1.1
Defline:  (1 of 1) K11491 - condensin-2 complex subunit D3 (NCAPD3) Genomic Order:  1300
Name:  ? Sobic.008G123400 Secondary Identifier:  ? PAC:37928665
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G123400 0.5kb upstream 0.5kb upstream 6791   true Chr08: 54627876-54634666 Sorghum bicolor
Sobic.008G123400 0.5kb upstream 0.5kb upstream 500   false Chr08: 54634167-54634666 Sorghum bicolor
Sobic.008G123400 0.5kb downstream 0.5kb downstream 6791   true Chr08: 54627376-54634166 Sorghum bicolor
Sobic.008G123400 0.5kb downstream 0.5kb downstream 500   false Chr08: 54627376-54627875 Sorghum bicolor
Sobic.008G123400 1.0kb upstream 1.0kb upstream 7291   true Chr08: 54627876-54635166 Sorghum bicolor
Sobic.008G123400 1.0kb upstream 1.0kb upstream 1000   false Chr08: 54634167-54635166 Sorghum bicolor
Sobic.008G123400 1.0kb downstream 1.0kb downstream 7291   true Chr08: 54626876-54634166 Sorghum bicolor
Sobic.008G123400 1.0kb downstream 1.0kb downstream 1000   false Chr08: 54626876-54627875 Sorghum bicolor
Sobic.008G123400 2.0kb upstream 2.0kb upstream 8291   true Chr08: 54627876-54636166 Sorghum bicolor
Sobic.008G123400 2.0kb upstream 2.0kb upstream 2000   false Chr08: 54634167-54636166 Sorghum bicolor
Sobic.008G123400 2.0kb downstream 2.0kb downstream 8291   true Chr08: 54625876-54634166 Sorghum bicolor
Sobic.008G123400 2.0kb downstream 2.0kb downstream 2000   false Chr08: 54625876-54627875 Sorghum bicolor
Sobic.008G123400 5.0kb upstream 5.0kb upstream 11291   true Chr08: 54627876-54639166 Sorghum bicolor
Sobic.008G123400 5.0kb upstream 5.0kb upstream 5000   false Chr08: 54634167-54639166 Sorghum bicolor
Sobic.008G123400 5.0kb downstream 5.0kb downstream 11291   true Chr08: 54622876-54634166 Sorghum bicolor
Sobic.008G123400 5.0kb downstream 5.0kb downstream 5000   false Chr08: 54622876-54627875 Sorghum bicolor
Sobic.008G123400 10.0kb upstream 10.0kb upstream 16291   true Chr08: 54627876-54644166 Sorghum bicolor
Sobic.008G123400 10.0kb upstream 10.0kb upstream 10000   false Chr08: 54634167-54644166 Sorghum bicolor
Sobic.008G123400 10.0kb downstream 10.0kb downstream 16291   true Chr08: 54617876-54634166 Sorghum bicolor
Sobic.008G123400 10.0kb downstream 10.0kb downstream 10000   false Chr08: 54617876-54627875 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027913 5273 Angiosperm View MSA
122182129 5267 Panicoideae View MSA
124575652 5269 Grass View MSA
121345565 5274 Embryophyte View MSA
123425624 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.837        
cufflinks 0.039     Low Low
cufflinks 0.086       Low
cufflinks 0.109       Low
cufflinks 8.127       High
cufflinks 0.395        
cufflinks 5.572        
cufflinks 0.496        
cufflinks 1.313        
cufflinks 0.932        
cufflinks 4.968        
cufflinks 4.392        
cufflinks 0.749        
cufflinks 4.334        
cufflinks 3.014        
cufflinks 0.048     Low Low
cufflinks 4.981        
cufflinks 5.233        
cufflinks 0.124       Low
cufflinks 2.75        
cufflinks 17.933     High High
cufflinks 5.515        
cufflinks 4.946        
cufflinks 5.824        
cufflinks 0.044     Low Low
cufflinks 0.043       Low
cufflinks 1.499        
cufflinks 0.663        
cufflinks 2.374        
cufflinks 6.058        

0 Strain