Gene : Sobic.008G125100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11136:SF0 - DIHYDROFOLATE SYNTHETASE-RELATED Genomic Order:  1319
Name:  ? Sobic.008G125100 Secondary Identifier:  ? PAC:37927218
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6612 Sorghum bicolor pathologic  
Sbicolor PWY-6614 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G125100 0.5kb upstream 0.5kb upstream 6686   true Chr08: 54850504-54857189 Sorghum bicolor
Sobic.008G125100 0.5kb upstream 0.5kb upstream 500   false Chr08: 54850504-54851003 Sorghum bicolor
Sobic.008G125100 0.5kb downstream 0.5kb downstream 6686   true Chr08: 54851004-54857689 Sorghum bicolor
Sobic.008G125100 0.5kb downstream 0.5kb downstream 500   false Chr08: 54857190-54857689 Sorghum bicolor
Sobic.008G125100 1.0kb upstream 1.0kb upstream 7186   true Chr08: 54850004-54857189 Sorghum bicolor
Sobic.008G125100 1.0kb upstream 1.0kb upstream 1000   false Chr08: 54850004-54851003 Sorghum bicolor
Sobic.008G125100 1.0kb downstream 1.0kb downstream 7186   true Chr08: 54851004-54858189 Sorghum bicolor
Sobic.008G125100 1.0kb downstream 1.0kb downstream 1000   false Chr08: 54857190-54858189 Sorghum bicolor
Sobic.008G125100 2.0kb upstream 2.0kb upstream 8186   true Chr08: 54849004-54857189 Sorghum bicolor
Sobic.008G125100 2.0kb upstream 2.0kb upstream 2000   false Chr08: 54849004-54851003 Sorghum bicolor
Sobic.008G125100 2.0kb downstream 2.0kb downstream 8186   true Chr08: 54851004-54859189 Sorghum bicolor
Sobic.008G125100 2.0kb downstream 2.0kb downstream 2000   false Chr08: 54857190-54859189 Sorghum bicolor
Sobic.008G125100 5.0kb upstream 5.0kb upstream 11186   true Chr08: 54846004-54857189 Sorghum bicolor
Sobic.008G125100 5.0kb upstream 5.0kb upstream 5000   false Chr08: 54846004-54851003 Sorghum bicolor
Sobic.008G125100 5.0kb downstream 5.0kb downstream 11186   true Chr08: 54851004-54862189 Sorghum bicolor
Sobic.008G125100 5.0kb downstream 5.0kb downstream 5000   false Chr08: 54857190-54862189 Sorghum bicolor
Sobic.008G125100 10.0kb upstream 10.0kb upstream 16186   true Chr08: 54841004-54857189 Sorghum bicolor
Sobic.008G125100 10.0kb upstream 10.0kb upstream 10000   false Chr08: 54841004-54851003 Sorghum bicolor
Sobic.008G125100 10.0kb downstream 10.0kb downstream 16186   true Chr08: 54851004-54867189 Sorghum bicolor
Sobic.008G125100 10.0kb downstream 10.0kb downstream 10000   false Chr08: 54857190-54867189 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179347 5267 Panicoideae View MSA
124568279 5269 Grass View MSA
122043688 5273 Angiosperm View MSA
121344520 5274 Embryophyte View MSA
123426614 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.563        
cufflinks 0.607       Low
cufflinks 0.567       Low
cufflinks 0.695       Low
cufflinks 2.477        
cufflinks 1.699        
cufflinks 1.952        
cufflinks 1.43        
cufflinks 2.094        
cufflinks 2.001        
cufflinks 1.624        
cufflinks 1.65        
cufflinks 1.806        
cufflinks 1.832        
cufflinks 1.998        
cufflinks 0.941       Low
cufflinks 1.92        
cufflinks 1.85        
cufflinks 0.764       Low
cufflinks 1.809        
cufflinks 4.998       High
cufflinks 2.195        
cufflinks 2.003        
cufflinks 2.021        
cufflinks 0.776       Low
cufflinks 0.765       Low
cufflinks 1.31        
cufflinks 3.532       High
cufflinks 2.276        
cufflinks 2.243        

0 Strain