Gene : Sobic.008G124800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13251 - EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 Genomic Order:  1316
Name:  ? Sobic.008G124800 Secondary Identifier:  ? PAC:37928170
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G124800 0.5kb upstream 0.5kb upstream 17333   true Chr08: 54815887-54833219 Sorghum bicolor
Sobic.008G124800 0.5kb upstream 0.5kb upstream 500   false Chr08: 54832720-54833219 Sorghum bicolor
Sobic.008G124800 0.5kb downstream 0.5kb downstream 17333   true Chr08: 54815387-54832719 Sorghum bicolor
Sobic.008G124800 0.5kb downstream 0.5kb downstream 500   false Chr08: 54815387-54815886 Sorghum bicolor
Sobic.008G124800 1.0kb upstream 1.0kb upstream 17833   true Chr08: 54815887-54833719 Sorghum bicolor
Sobic.008G124800 1.0kb upstream 1.0kb upstream 1000   false Chr08: 54832720-54833719 Sorghum bicolor
Sobic.008G124800 1.0kb downstream 1.0kb downstream 17833   true Chr08: 54814887-54832719 Sorghum bicolor
Sobic.008G124800 1.0kb downstream 1.0kb downstream 1000   false Chr08: 54814887-54815886 Sorghum bicolor
Sobic.008G124800 2.0kb upstream 2.0kb upstream 18833   true Chr08: 54815887-54834719 Sorghum bicolor
Sobic.008G124800 2.0kb upstream 2.0kb upstream 2000   false Chr08: 54832720-54834719 Sorghum bicolor
Sobic.008G124800 2.0kb downstream 2.0kb downstream 18833   true Chr08: 54813887-54832719 Sorghum bicolor
Sobic.008G124800 2.0kb downstream 2.0kb downstream 2000   false Chr08: 54813887-54815886 Sorghum bicolor
Sobic.008G124800 5.0kb upstream 5.0kb upstream 21833   true Chr08: 54815887-54837719 Sorghum bicolor
Sobic.008G124800 5.0kb upstream 5.0kb upstream 5000   false Chr08: 54832720-54837719 Sorghum bicolor
Sobic.008G124800 5.0kb downstream 5.0kb downstream 21833   true Chr08: 54810887-54832719 Sorghum bicolor
Sobic.008G124800 5.0kb downstream 5.0kb downstream 5000   false Chr08: 54810887-54815886 Sorghum bicolor
Sobic.008G124800 10.0kb upstream 10.0kb upstream 26833   true Chr08: 54815887-54842719 Sorghum bicolor
Sobic.008G124800 10.0kb upstream 10.0kb upstream 10000   false Chr08: 54832720-54842719 Sorghum bicolor
Sobic.008G124800 10.0kb downstream 10.0kb downstream 26833   true Chr08: 54805887-54832719 Sorghum bicolor
Sobic.008G124800 10.0kb downstream 10.0kb downstream 10000   false Chr08: 54805887-54815886 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183376 5267 Panicoideae View MSA
124578118 5269 Grass View MSA
122046287 5273 Angiosperm View MSA
121348694 5274 Embryophyte View MSA
123380976 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.464       Low
cufflinks 1.014       Low
cufflinks 2.216        
cufflinks 2.645        
cufflinks 6.105        
cufflinks 2.979        
cufflinks 3.447        
cufflinks 1.789       Low
cufflinks 5.983        
cufflinks 5.281        
cufflinks 6.193        
cufflinks 5.89        
cufflinks 4.719        
cufflinks 5.6        
cufflinks 4.18        
cufflinks 1.501       Low
cufflinks 3.316        
cufflinks 3.458        
cufflinks 2.066       Low
cufflinks 3.932        
cufflinks 5.623        
cufflinks 7.744       High
cufflinks 6.246        
cufflinks 6.623        
cufflinks 2.293        
cufflinks 1.085       Low
cufflinks 4.639        
cufflinks 2.015       Low
cufflinks 4.002        
cufflinks 4.927        

0 Strain