Gene : Sobic.010G081700 S. bicolor v3.1.1
Defline:  (1 of 164) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  843
Name:  ? Sobic.010G081700 Secondary Identifier:  ? PAC:37911327
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G081700 0.5kb upstream 0.5kb upstream 5568   true Chr10: 6969483-6975050 Sorghum bicolor
Sobic.010G081700 0.5kb upstream 0.5kb upstream 500   false Chr10: 6969483-6969982 Sorghum bicolor
Sobic.010G081700 0.5kb downstream 0.5kb downstream 5568   true Chr10: 6969983-6975550 Sorghum bicolor
Sobic.010G081700 0.5kb downstream 0.5kb downstream 500   false Chr10: 6975051-6975550 Sorghum bicolor
Sobic.010G081700 1.0kb upstream 1.0kb upstream 6068   true Chr10: 6968983-6975050 Sorghum bicolor
Sobic.010G081700 1.0kb upstream 1.0kb upstream 1000   false Chr10: 6968983-6969982 Sorghum bicolor
Sobic.010G081700 1.0kb downstream 1.0kb downstream 6068   true Chr10: 6969983-6976050 Sorghum bicolor
Sobic.010G081700 1.0kb downstream 1.0kb downstream 1000   false Chr10: 6975051-6976050 Sorghum bicolor
Sobic.010G081700 2.0kb upstream 2.0kb upstream 7068   true Chr10: 6967983-6975050 Sorghum bicolor
Sobic.010G081700 2.0kb upstream 2.0kb upstream 2000   false Chr10: 6967983-6969982 Sorghum bicolor
Sobic.010G081700 2.0kb downstream 2.0kb downstream 7068   true Chr10: 6969983-6977050 Sorghum bicolor
Sobic.010G081700 2.0kb downstream 2.0kb downstream 2000   false Chr10: 6975051-6977050 Sorghum bicolor
Sobic.010G081700 5.0kb upstream 5.0kb upstream 10068   true Chr10: 6964983-6975050 Sorghum bicolor
Sobic.010G081700 5.0kb upstream 5.0kb upstream 5000   false Chr10: 6964983-6969982 Sorghum bicolor
Sobic.010G081700 5.0kb downstream 5.0kb downstream 10068   true Chr10: 6969983-6980050 Sorghum bicolor
Sobic.010G081700 5.0kb downstream 5.0kb downstream 5000   false Chr10: 6975051-6980050 Sorghum bicolor
Sobic.010G081700 10.0kb upstream 10.0kb upstream 15068   true Chr10: 6959983-6975050 Sorghum bicolor
Sobic.010G081700 10.0kb upstream 10.0kb upstream 10000   false Chr10: 6959983-6969982 Sorghum bicolor
Sobic.010G081700 10.0kb downstream 10.0kb downstream 15068   true Chr10: 6969983-6985050 Sorghum bicolor
Sobic.010G081700 10.0kb downstream 10.0kb downstream 10000   false Chr10: 6975051-6985050 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190917 5267 Panicoideae View MSA
124572729 5269 Grass View MSA
122045173 5273 Angiosperm View MSA
121310410 5274 Embryophyte View MSA
123347900 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.878        
cufflinks 0.603       Low
cufflinks 1.217       Low
cufflinks 1.326       Low
cufflinks 5.51       High
cufflinks 2.392        
cufflinks 2.553        
cufflinks 1.206       Low
cufflinks 4.193        
cufflinks 3.522        
cufflinks 3.137        
cufflinks 3.922        
cufflinks 2.607        
cufflinks 4.542        
cufflinks 2.975        
cufflinks 0.964       Low
cufflinks 2.53        
cufflinks 2.743        
cufflinks 1.634        
cufflinks 2.482        
cufflinks 5.812       High
cufflinks 4.03        
cufflinks 3.86        
cufflinks 4.506        
cufflinks 0.908       Low
cufflinks 0.616       Low
cufflinks 3.449        
cufflinks 1.425       Low
cufflinks 2.465        
cufflinks 4.246        

0 Strain