Gene : Sobic.008G130900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR21011//PTHR21011:SF4 - MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 // SUBFAMILY NOT NAMED Genomic Order:  1375
Name:  ? Sobic.008G130900 Secondary Identifier:  ? PAC:37926906
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G130900 0.5kb upstream 0.5kb upstream 3025   true Chr08: 55685356-55688380 Sorghum bicolor
Sobic.008G130900 0.5kb upstream 0.5kb upstream 500   false Chr08: 55687881-55688380 Sorghum bicolor
Sobic.008G130900 0.5kb downstream 0.5kb downstream 3025   true Chr08: 55684856-55687880 Sorghum bicolor
Sobic.008G130900 0.5kb downstream 0.5kb downstream 500   false Chr08: 55684856-55685355 Sorghum bicolor
Sobic.008G130900 1.0kb upstream 1.0kb upstream 3525   true Chr08: 55685356-55688880 Sorghum bicolor
Sobic.008G130900 1.0kb upstream 1.0kb upstream 1000   false Chr08: 55687881-55688880 Sorghum bicolor
Sobic.008G130900 1.0kb downstream 1.0kb downstream 3525   true Chr08: 55684356-55687880 Sorghum bicolor
Sobic.008G130900 1.0kb downstream 1.0kb downstream 1000   false Chr08: 55684356-55685355 Sorghum bicolor
Sobic.008G130900 2.0kb upstream 2.0kb upstream 4525   true Chr08: 55685356-55689880 Sorghum bicolor
Sobic.008G130900 2.0kb upstream 2.0kb upstream 2000   false Chr08: 55687881-55689880 Sorghum bicolor
Sobic.008G130900 2.0kb downstream 2.0kb downstream 4525   true Chr08: 55683356-55687880 Sorghum bicolor
Sobic.008G130900 2.0kb downstream 2.0kb downstream 2000   false Chr08: 55683356-55685355 Sorghum bicolor
Sobic.008G130900 5.0kb upstream 5.0kb upstream 7525   true Chr08: 55685356-55692880 Sorghum bicolor
Sobic.008G130900 5.0kb upstream 5.0kb upstream 5000   false Chr08: 55687881-55692880 Sorghum bicolor
Sobic.008G130900 5.0kb downstream 5.0kb downstream 7525   true Chr08: 55680356-55687880 Sorghum bicolor
Sobic.008G130900 5.0kb downstream 5.0kb downstream 5000   false Chr08: 55680356-55685355 Sorghum bicolor
Sobic.008G130900 10.0kb upstream 10.0kb upstream 12525   true Chr08: 55685356-55697880 Sorghum bicolor
Sobic.008G130900 10.0kb upstream 10.0kb upstream 10000   false Chr08: 55687881-55697880 Sorghum bicolor
Sobic.008G130900 10.0kb downstream 10.0kb downstream 12525   true Chr08: 55675356-55687880 Sorghum bicolor
Sobic.008G130900 10.0kb downstream 10.0kb downstream 10000   false Chr08: 55675356-55685355 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189962 5267 Panicoideae View MSA
124576263 5269 Grass View MSA
122045597 5273 Angiosperm View MSA
121347704 5274 Embryophyte View MSA
123380604 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.586        
cufflinks 1.604        
cufflinks 8.927       High
cufflinks 13.357     High High
cufflinks 2.961        
cufflinks 6.277        
cufflinks 7.556       High
cufflinks 4.937        
cufflinks 4.003        
cufflinks 3.375        
cufflinks 1.191       Low
cufflinks 1.578        
cufflinks 1.592        
cufflinks 1.104       Low
cufflinks 3.551        
cufflinks 6.235        
cufflinks 8.985       High
cufflinks 12.964     High High
cufflinks 3.601        
cufflinks 7.065        
cufflinks 3.738        
cufflinks 1.408        
cufflinks 1.492        
cufflinks 1.389        
cufflinks 2.106        
cufflinks 0.784       Low
cufflinks 1.512        
cufflinks 9.038       High
cufflinks 24.593     High High
cufflinks 5.436        

0 Strain