Gene : Sobic.008G131000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22778//PTHR22778:SF0 - OVARIAN CANCER GENE-2 PROTEIN-RELATED // OVARIAN CANCER-ASSOCIATED GENE 2 PROTEIN Genomic Order:  1376
Name:  ? Sobic.008G131000 Secondary Identifier:  ? PAC:37928032
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G131000 0.5kb upstream 0.5kb upstream 3759   true Chr08: 55687613-55691371 Sorghum bicolor
Sobic.008G131000 0.5kb upstream 0.5kb upstream 500   false Chr08: 55687613-55688112 Sorghum bicolor
Sobic.008G131000 0.5kb downstream 0.5kb downstream 3759   true Chr08: 55688113-55691871 Sorghum bicolor
Sobic.008G131000 0.5kb downstream 0.5kb downstream 500   false Chr08: 55691372-55691871 Sorghum bicolor
Sobic.008G131000 1.0kb upstream 1.0kb upstream 4259   true Chr08: 55687113-55691371 Sorghum bicolor
Sobic.008G131000 1.0kb upstream 1.0kb upstream 1000   false Chr08: 55687113-55688112 Sorghum bicolor
Sobic.008G131000 1.0kb downstream 1.0kb downstream 4259   true Chr08: 55688113-55692371 Sorghum bicolor
Sobic.008G131000 1.0kb downstream 1.0kb downstream 1000   false Chr08: 55691372-55692371 Sorghum bicolor
Sobic.008G131000 2.0kb upstream 2.0kb upstream 5259   true Chr08: 55686113-55691371 Sorghum bicolor
Sobic.008G131000 2.0kb upstream 2.0kb upstream 2000   false Chr08: 55686113-55688112 Sorghum bicolor
Sobic.008G131000 2.0kb downstream 2.0kb downstream 5259   true Chr08: 55688113-55693371 Sorghum bicolor
Sobic.008G131000 2.0kb downstream 2.0kb downstream 2000   false Chr08: 55691372-55693371 Sorghum bicolor
Sobic.008G131000 5.0kb upstream 5.0kb upstream 8259   true Chr08: 55683113-55691371 Sorghum bicolor
Sobic.008G131000 5.0kb upstream 5.0kb upstream 5000   false Chr08: 55683113-55688112 Sorghum bicolor
Sobic.008G131000 5.0kb downstream 5.0kb downstream 8259   true Chr08: 55688113-55696371 Sorghum bicolor
Sobic.008G131000 5.0kb downstream 5.0kb downstream 5000   false Chr08: 55691372-55696371 Sorghum bicolor
Sobic.008G131000 10.0kb upstream 10.0kb upstream 13259   true Chr08: 55678113-55691371 Sorghum bicolor
Sobic.008G131000 10.0kb upstream 10.0kb upstream 10000   false Chr08: 55678113-55688112 Sorghum bicolor
Sobic.008G131000 10.0kb downstream 10.0kb downstream 13259   true Chr08: 55688113-55701371 Sorghum bicolor
Sobic.008G131000 10.0kb downstream 10.0kb downstream 10000   false Chr08: 55691372-55701371 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182391 5267 Panicoideae View MSA
124575788 5269 Grass View MSA
122041526 5273 Angiosperm View MSA
121343974 5274 Embryophyte View MSA
123427771 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.566        
cufflinks 0.555       Low
cufflinks 1.201       Low
cufflinks 2.293        
cufflinks 4.258        
cufflinks 4.143        
cufflinks 2.405        
cufflinks 0.896       Low
cufflinks 4.801        
cufflinks 4.58        
cufflinks 3.001        
cufflinks 3.27        
cufflinks 3.349        
cufflinks 2.74        
cufflinks 3.107        
cufflinks 1.786        
cufflinks 2.718        
cufflinks 3.188        
cufflinks 1.719        
cufflinks 3.208        
cufflinks 7.886       High
cufflinks 3.685        
cufflinks 2.911        
cufflinks 3.317        
cufflinks 1.148       Low
cufflinks 0.48       Low
cufflinks 2.5        
cufflinks 8.534       High
cufflinks 1.853        
cufflinks 4.258        

0 Strain