Gene : Sobic.010G079000 S. bicolor v3.1.1
Defline:  (1 of 3) K18045 - tyrosine-protein phosphatase SIW14 [EC:3.1.3.48] (SIW14, OCA3) Genomic Order:  814
Name:  ? Sobic.010G079000 Secondary Identifier:  ? PAC:37909467
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G079000 0.5kb upstream 0.5kb upstream 5304   true Chr10: 6651109-6656412 Sorghum bicolor
Sobic.010G079000 0.5kb upstream 0.5kb upstream 500   false Chr10: 6651109-6651608 Sorghum bicolor
Sobic.010G079000 0.5kb downstream 0.5kb downstream 5304   true Chr10: 6651609-6656912 Sorghum bicolor
Sobic.010G079000 0.5kb downstream 0.5kb downstream 500   false Chr10: 6656413-6656912 Sorghum bicolor
Sobic.010G079000 1.0kb upstream 1.0kb upstream 5804   true Chr10: 6650609-6656412 Sorghum bicolor
Sobic.010G079000 1.0kb upstream 1.0kb upstream 1000   false Chr10: 6650609-6651608 Sorghum bicolor
Sobic.010G079000 1.0kb downstream 1.0kb downstream 5804   true Chr10: 6651609-6657412 Sorghum bicolor
Sobic.010G079000 1.0kb downstream 1.0kb downstream 1000   false Chr10: 6656413-6657412 Sorghum bicolor
Sobic.010G079000 2.0kb upstream 2.0kb upstream 6804   true Chr10: 6649609-6656412 Sorghum bicolor
Sobic.010G079000 2.0kb upstream 2.0kb upstream 2000   false Chr10: 6649609-6651608 Sorghum bicolor
Sobic.010G079000 2.0kb downstream 2.0kb downstream 6804   true Chr10: 6651609-6658412 Sorghum bicolor
Sobic.010G079000 2.0kb downstream 2.0kb downstream 2000   false Chr10: 6656413-6658412 Sorghum bicolor
Sobic.010G079000 5.0kb upstream 5.0kb upstream 9804   true Chr10: 6646609-6656412 Sorghum bicolor
Sobic.010G079000 5.0kb upstream 5.0kb upstream 5000   false Chr10: 6646609-6651608 Sorghum bicolor
Sobic.010G079000 5.0kb downstream 5.0kb downstream 9804   true Chr10: 6651609-6661412 Sorghum bicolor
Sobic.010G079000 5.0kb downstream 5.0kb downstream 5000   false Chr10: 6656413-6661412 Sorghum bicolor
Sobic.010G079000 10.0kb upstream 10.0kb upstream 14804   true Chr10: 6641609-6656412 Sorghum bicolor
Sobic.010G079000 10.0kb upstream 10.0kb upstream 10000   false Chr10: 6641609-6651608 Sorghum bicolor
Sobic.010G079000 10.0kb downstream 10.0kb downstream 14804   true Chr10: 6651609-6666412 Sorghum bicolor
Sobic.010G079000 10.0kb downstream 10.0kb downstream 10000   false Chr10: 6656413-6666412 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191546 5267 Panicoideae View MSA
124578787 5269 Grass View MSA
122050938 5273 Angiosperm View MSA
121344841 5274 Embryophyte View MSA
123380112 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.031     High  
cufflinks 72.843     High High
cufflinks 5.02       Low
cufflinks 8.872        
cufflinks 8.227        
cufflinks 10.539        
cufflinks 24.574     High High
cufflinks 31.383     High High
cufflinks 7.204        
cufflinks 11.873     High  
cufflinks 9.038        
cufflinks 5.034       Low
cufflinks 9.615        
cufflinks 10.024        
cufflinks 6.917        
cufflinks 28.283     High High
cufflinks 28.314     High High
cufflinks 17.003     High  
cufflinks 10.513        
cufflinks 7.883        
cufflinks 3.799       Low
cufflinks 9.793        
cufflinks 6.868        
cufflinks 6.96        
cufflinks 50.474     High High
cufflinks 44.516     High High
cufflinks 12.304     High  
cufflinks 4.274       Low
cufflinks 9.938        
cufflinks 5.178       Low

0 Strain