Gene : Sobic.008G132900 S. bicolor v3.1.1
Defline:  (1 of 1) PF10650 - Putative zinc-finger domain (zf-C3H1) Genomic Order:  1398
Name:  ? Sobic.008G132900 Secondary Identifier:  ? PAC:37927057
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G132900 0.5kb upstream 0.5kb upstream 8980   true Chr08: 55947754-55956733 Sorghum bicolor
Sobic.008G132900 0.5kb upstream 0.5kb upstream 500   false Chr08: 55947754-55948253 Sorghum bicolor
Sobic.008G132900 0.5kb downstream 0.5kb downstream 8980   true Chr08: 55948254-55957233 Sorghum bicolor
Sobic.008G132900 0.5kb downstream 0.5kb downstream 500   false Chr08: 55956734-55957233 Sorghum bicolor
Sobic.008G132900 1.0kb upstream 1.0kb upstream 9480   true Chr08: 55947254-55956733 Sorghum bicolor
Sobic.008G132900 1.0kb upstream 1.0kb upstream 1000   false Chr08: 55947254-55948253 Sorghum bicolor
Sobic.008G132900 1.0kb downstream 1.0kb downstream 9480   true Chr08: 55948254-55957733 Sorghum bicolor
Sobic.008G132900 1.0kb downstream 1.0kb downstream 1000   false Chr08: 55956734-55957733 Sorghum bicolor
Sobic.008G132900 2.0kb upstream 2.0kb upstream 10480   true Chr08: 55946254-55956733 Sorghum bicolor
Sobic.008G132900 2.0kb upstream 2.0kb upstream 2000   false Chr08: 55946254-55948253 Sorghum bicolor
Sobic.008G132900 2.0kb downstream 2.0kb downstream 10480   true Chr08: 55948254-55958733 Sorghum bicolor
Sobic.008G132900 2.0kb downstream 2.0kb downstream 2000   false Chr08: 55956734-55958733 Sorghum bicolor
Sobic.008G132900 5.0kb upstream 5.0kb upstream 13480   true Chr08: 55943254-55956733 Sorghum bicolor
Sobic.008G132900 5.0kb upstream 5.0kb upstream 5000   false Chr08: 55943254-55948253 Sorghum bicolor
Sobic.008G132900 5.0kb downstream 5.0kb downstream 13480   true Chr08: 55948254-55961733 Sorghum bicolor
Sobic.008G132900 5.0kb downstream 5.0kb downstream 5000   false Chr08: 55956734-55961733 Sorghum bicolor
Sobic.008G132900 10.0kb upstream 10.0kb upstream 18480   true Chr08: 55938254-55956733 Sorghum bicolor
Sobic.008G132900 10.0kb upstream 10.0kb upstream 10000   false Chr08: 55938254-55948253 Sorghum bicolor
Sobic.008G132900 10.0kb downstream 10.0kb downstream 18480   true Chr08: 55948254-55966733 Sorghum bicolor
Sobic.008G132900 10.0kb downstream 10.0kb downstream 10000   false Chr08: 55956734-55966733 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187132 5267 Panicoideae View MSA
124570038 5269 Grass View MSA
122048240 5273 Angiosperm View MSA
121310901 5274 Embryophyte View MSA
123348277 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.633        
cufflinks 1.596       Low
cufflinks 2.349        
cufflinks 4.183        
cufflinks 6.02       High
cufflinks 3.787        
cufflinks 2.432        
cufflinks 1.715       Low
cufflinks 7.224       High
cufflinks 7.104       High
cufflinks 4.529        
cufflinks 5.451        
cufflinks 3.473        
cufflinks 4.588        
cufflinks 5.846       High
cufflinks 2.721        
cufflinks 2.278       Low
cufflinks 1.933       Low
cufflinks 3.091        
cufflinks 4.078        
cufflinks 9.35       High
cufflinks 4.144        
cufflinks 4.316        
cufflinks 4.238        
cufflinks 3.449        
cufflinks 1.522       Low
cufflinks 4.095        
cufflinks 4.4        
cufflinks 1.891       Low
cufflinks 7.08       High

0 Strain