Gene : Sobic.010G074500 S. bicolor v3.1.1
Defline:  (1 of 3) K01598 - phosphopantothenoylcysteine decarboxylase (PPCDC, coaC) Genomic Order:  762
Name:  ? Sobic.010G074500 Secondary Identifier:  ? PAC:37910879
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor COA-PWY Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G074500 0.5kb upstream 0.5kb upstream 3469   true Chr10: 6070724-6074192 Sorghum bicolor
Sobic.010G074500 0.5kb upstream 0.5kb upstream 500   false Chr10: 6073693-6074192 Sorghum bicolor
Sobic.010G074500 0.5kb downstream 0.5kb downstream 3469   true Chr10: 6070224-6073692 Sorghum bicolor
Sobic.010G074500 0.5kb downstream 0.5kb downstream 500   false Chr10: 6070224-6070723 Sorghum bicolor
Sobic.010G074500 1.0kb upstream 1.0kb upstream 3969   true Chr10: 6070724-6074692 Sorghum bicolor
Sobic.010G074500 1.0kb upstream 1.0kb upstream 1000   false Chr10: 6073693-6074692 Sorghum bicolor
Sobic.010G074500 1.0kb downstream 1.0kb downstream 3969   true Chr10: 6069724-6073692 Sorghum bicolor
Sobic.010G074500 1.0kb downstream 1.0kb downstream 1000   false Chr10: 6069724-6070723 Sorghum bicolor
Sobic.010G074500 2.0kb upstream 2.0kb upstream 4969   true Chr10: 6070724-6075692 Sorghum bicolor
Sobic.010G074500 2.0kb upstream 2.0kb upstream 2000   false Chr10: 6073693-6075692 Sorghum bicolor
Sobic.010G074500 2.0kb downstream 2.0kb downstream 4969   true Chr10: 6068724-6073692 Sorghum bicolor
Sobic.010G074500 2.0kb downstream 2.0kb downstream 2000   false Chr10: 6068724-6070723 Sorghum bicolor
Sobic.010G074500 5.0kb upstream 5.0kb upstream 7969   true Chr10: 6070724-6078692 Sorghum bicolor
Sobic.010G074500 5.0kb upstream 5.0kb upstream 5000   false Chr10: 6073693-6078692 Sorghum bicolor
Sobic.010G074500 5.0kb downstream 5.0kb downstream 7969   true Chr10: 6065724-6073692 Sorghum bicolor
Sobic.010G074500 5.0kb downstream 5.0kb downstream 5000   false Chr10: 6065724-6070723 Sorghum bicolor
Sobic.010G074500 10.0kb upstream 10.0kb upstream 12969   true Chr10: 6070724-6083692 Sorghum bicolor
Sobic.010G074500 10.0kb upstream 10.0kb upstream 10000   false Chr10: 6073693-6083692 Sorghum bicolor
Sobic.010G074500 10.0kb downstream 10.0kb downstream 12969   true Chr10: 6060724-6073692 Sorghum bicolor
Sobic.010G074500 10.0kb downstream 10.0kb downstream 10000   false Chr10: 6060724-6070723 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186153 5267 Panicoideae View MSA
124582681 5269 Grass View MSA
122043934 5273 Angiosperm View MSA
121347279 5274 Embryophyte View MSA
123427433 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.915     High High
cufflinks 7.464     High Low
cufflinks 11.623     High  
cufflinks 17.147     High  
cufflinks 17.49     High  
cufflinks 32.635     High High
cufflinks 16.072     High  
cufflinks 8.446       Low
cufflinks 17.072     High  
cufflinks 18.199     High  
cufflinks 11.947     High  
cufflinks 13.69     High  
cufflinks 27.455     High High
cufflinks 12.696     High  
cufflinks 25.844     High High
cufflinks 15.619     High  
cufflinks 15.956     High  
cufflinks 16.213     High  
cufflinks 12.378     High  
cufflinks 17.907     High  
cufflinks 23.903     High High
cufflinks 13.602     High  
cufflinks 12.995     High  
cufflinks 13.353     High  
cufflinks 10.366     High Low
cufflinks 5.404       Low
cufflinks 12.694     High  
cufflinks 7.828       Low
cufflinks 14.394     High  
cufflinks 23.064     High High

0 Strain