Gene : Sobic.010G073500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11712//PTHR11712:SF286 - POLYKETIDE SYNTHASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  751
Name:  ? Sobic.010G073500 Secondary Identifier:  ? PAC:37911816
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor FASYN-ELONG-PWY Sorghum bicolor pathologic  
Sbicolor PWY-5156 Sorghum bicolor pathologic  
Sbicolor PWY-5971 Sorghum bicolor pathologic  
Sbicolor PWY-5989 Sorghum bicolor pathologic  
Sbicolor PWY-6282 Sorghum bicolor pathologic  
Sbicolor PWY-7388 Sorghum bicolor pathologic  
Sbicolor PWY-7663 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G073500 0.5kb upstream 0.5kb upstream 5078   true Chr10: 5997636-6002713 Sorghum bicolor
Sobic.010G073500 0.5kb upstream 0.5kb upstream 500   false Chr10: 6002214-6002713 Sorghum bicolor
Sobic.010G073500 0.5kb downstream 0.5kb downstream 5078   true Chr10: 5997136-6002213 Sorghum bicolor
Sobic.010G073500 0.5kb downstream 0.5kb downstream 500   false Chr10: 5997136-5997635 Sorghum bicolor
Sobic.010G073500 1.0kb upstream 1.0kb upstream 5578   true Chr10: 5997636-6003213 Sorghum bicolor
Sobic.010G073500 1.0kb upstream 1.0kb upstream 1000   false Chr10: 6002214-6003213 Sorghum bicolor
Sobic.010G073500 1.0kb downstream 1.0kb downstream 5578   true Chr10: 5996636-6002213 Sorghum bicolor
Sobic.010G073500 1.0kb downstream 1.0kb downstream 1000   false Chr10: 5996636-5997635 Sorghum bicolor
Sobic.010G073500 2.0kb upstream 2.0kb upstream 6578   true Chr10: 5997636-6004213 Sorghum bicolor
Sobic.010G073500 2.0kb upstream 2.0kb upstream 2000   false Chr10: 6002214-6004213 Sorghum bicolor
Sobic.010G073500 2.0kb downstream 2.0kb downstream 6578   true Chr10: 5995636-6002213 Sorghum bicolor
Sobic.010G073500 2.0kb downstream 2.0kb downstream 2000   false Chr10: 5995636-5997635 Sorghum bicolor
Sobic.010G073500 5.0kb upstream 5.0kb upstream 9578   true Chr10: 5997636-6007213 Sorghum bicolor
Sobic.010G073500 5.0kb upstream 5.0kb upstream 5000   false Chr10: 6002214-6007213 Sorghum bicolor
Sobic.010G073500 5.0kb downstream 5.0kb downstream 9578   true Chr10: 5992636-6002213 Sorghum bicolor
Sobic.010G073500 5.0kb downstream 5.0kb downstream 5000   false Chr10: 5992636-5997635 Sorghum bicolor
Sobic.010G073500 10.0kb upstream 10.0kb upstream 14578   true Chr10: 5997636-6012213 Sorghum bicolor
Sobic.010G073500 10.0kb upstream 10.0kb upstream 10000   false Chr10: 6002214-6012213 Sorghum bicolor
Sobic.010G073500 10.0kb downstream 10.0kb downstream 14578   true Chr10: 5987636-6002213 Sorghum bicolor
Sobic.010G073500 10.0kb downstream 10.0kb downstream 10000   false Chr10: 5987636-5997635 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196973 5267 Panicoideae View MSA
124574640 5269 Grass View MSA
122044089 5273 Angiosperm View MSA
121347391 5274 Embryophyte View MSA
123426303 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.91     High  
cufflinks 7.296     High Low
cufflinks 11.762     High  
cufflinks 12.056        
cufflinks 26.267     High  
cufflinks 21.417     High  
cufflinks 36.577     High  
cufflinks 21.854     High  
cufflinks 12.16        
cufflinks 14.141     High  
cufflinks 40.53     High  
cufflinks 39.063     High  
cufflinks 14.544     High  
cufflinks 34.282     High  
cufflinks 17.94     High  
cufflinks 8.851       Low
cufflinks 39.49     High  
cufflinks 44.48     High  
cufflinks 10.932     High Low
cufflinks 28.412     High  
cufflinks 26.565     High  
cufflinks 65.686     High High
cufflinks 48.618     High High
cufflinks 48.402     High  
cufflinks 5.208       Low
cufflinks 7.538     High Low
cufflinks 68.043     High High
cufflinks 2.816       Low
cufflinks 66.711     High High
cufflinks 28.303     High  

0 Strain