Gene : Sobic.010G133400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12280//PTHR12280:SF31 - PANTOTHENATE KINASE // SUBFAMILY NOT NAMED Genomic Order:  1404
Name:  ? Sobic.010G133400 Secondary Identifier:  ? PAC:37911468
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G133400 0.5kb upstream 0.5kb upstream 6942   true Chr10: 19417831-19424772 Sorghum bicolor
Sobic.010G133400 0.5kb upstream 0.5kb upstream 500   false Chr10: 19417831-19418330 Sorghum bicolor
Sobic.010G133400 0.5kb downstream 0.5kb downstream 6942   true Chr10: 19418331-19425272 Sorghum bicolor
Sobic.010G133400 0.5kb downstream 0.5kb downstream 500   false Chr10: 19424773-19425272 Sorghum bicolor
Sobic.010G133400 1.0kb upstream 1.0kb upstream 7442   true Chr10: 19417331-19424772 Sorghum bicolor
Sobic.010G133400 1.0kb upstream 1.0kb upstream 1000   false Chr10: 19417331-19418330 Sorghum bicolor
Sobic.010G133400 1.0kb downstream 1.0kb downstream 7442   true Chr10: 19418331-19425772 Sorghum bicolor
Sobic.010G133400 1.0kb downstream 1.0kb downstream 1000   false Chr10: 19424773-19425772 Sorghum bicolor
Sobic.010G133400 2.0kb upstream 2.0kb upstream 8442   true Chr10: 19416331-19424772 Sorghum bicolor
Sobic.010G133400 2.0kb upstream 2.0kb upstream 2000   false Chr10: 19416331-19418330 Sorghum bicolor
Sobic.010G133400 2.0kb downstream 2.0kb downstream 8442   true Chr10: 19418331-19426772 Sorghum bicolor
Sobic.010G133400 2.0kb downstream 2.0kb downstream 2000   false Chr10: 19424773-19426772 Sorghum bicolor
Sobic.010G133400 5.0kb upstream 5.0kb upstream 11442   true Chr10: 19413331-19424772 Sorghum bicolor
Sobic.010G133400 5.0kb upstream 5.0kb upstream 5000   false Chr10: 19413331-19418330 Sorghum bicolor
Sobic.010G133400 5.0kb downstream 5.0kb downstream 11442   true Chr10: 19418331-19429772 Sorghum bicolor
Sobic.010G133400 5.0kb downstream 5.0kb downstream 5000   false Chr10: 19424773-19429772 Sorghum bicolor
Sobic.010G133400 10.0kb upstream 10.0kb upstream 16442   true Chr10: 19408331-19424772 Sorghum bicolor
Sobic.010G133400 10.0kb upstream 10.0kb upstream 10000   false Chr10: 19408331-19418330 Sorghum bicolor
Sobic.010G133400 10.0kb downstream 10.0kb downstream 16442   true Chr10: 19418331-19434772 Sorghum bicolor
Sobic.010G133400 10.0kb downstream 10.0kb downstream 10000   false Chr10: 19424773-19434772 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185447 5267 Panicoideae View MSA
124577424 5269 Grass View MSA
122042661 5273 Angiosperm View MSA
121343944 5274 Embryophyte View MSA
123428038 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.51     High  
cufflinks 4.6       Low
cufflinks 9.202        
cufflinks 13.418     High  
cufflinks 13.804     High  
cufflinks 12.794        
cufflinks 10.977        
cufflinks 6.251       Low
cufflinks 17.543     High  
cufflinks 19.324     High High
cufflinks 12.723     High  
cufflinks 12.982     High  
cufflinks 14.217     High  
cufflinks 14.859     High  
cufflinks 14.753     High  
cufflinks 7.33       Low
cufflinks 11.986     High  
cufflinks 12.078     High  
cufflinks 6.91       Low
cufflinks 13.73     High  
cufflinks 13.906        
cufflinks 18.485     High High
cufflinks 16.463     High  
cufflinks 15.827     High  
cufflinks 5.641       Low
cufflinks 4.35       Low
cufflinks 14.075     High  
cufflinks 6.329       Low
cufflinks 10.349        
cufflinks 16.295     High  

0 Strain