Gene : Sobic.010G132300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR14894 - CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3 Genomic Order:  1388
Name:  ? Sobic.010G132300 Secondary Identifier:  ? PAC:37911285
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G132300 0.5kb upstream 0.5kb upstream 7408   true Chr10: 18281911-18289318 Sorghum bicolor
Sobic.010G132300 0.5kb upstream 0.5kb upstream 500   false Chr10: 18281911-18282410 Sorghum bicolor
Sobic.010G132300 0.5kb downstream 0.5kb downstream 7408   true Chr10: 18282411-18289818 Sorghum bicolor
Sobic.010G132300 0.5kb downstream 0.5kb downstream 500   false Chr10: 18289319-18289818 Sorghum bicolor
Sobic.010G132300 1.0kb upstream 1.0kb upstream 7908   true Chr10: 18281411-18289318 Sorghum bicolor
Sobic.010G132300 1.0kb upstream 1.0kb upstream 1000   false Chr10: 18281411-18282410 Sorghum bicolor
Sobic.010G132300 1.0kb downstream 1.0kb downstream 7908   true Chr10: 18282411-18290318 Sorghum bicolor
Sobic.010G132300 1.0kb downstream 1.0kb downstream 1000   false Chr10: 18289319-18290318 Sorghum bicolor
Sobic.010G132300 2.0kb upstream 2.0kb upstream 8908   true Chr10: 18280411-18289318 Sorghum bicolor
Sobic.010G132300 2.0kb upstream 2.0kb upstream 2000   false Chr10: 18280411-18282410 Sorghum bicolor
Sobic.010G132300 2.0kb downstream 2.0kb downstream 8908   true Chr10: 18282411-18291318 Sorghum bicolor
Sobic.010G132300 2.0kb downstream 2.0kb downstream 2000   false Chr10: 18289319-18291318 Sorghum bicolor
Sobic.010G132300 5.0kb upstream 5.0kb upstream 11908   true Chr10: 18277411-18289318 Sorghum bicolor
Sobic.010G132300 5.0kb upstream 5.0kb upstream 5000   false Chr10: 18277411-18282410 Sorghum bicolor
Sobic.010G132300 5.0kb downstream 5.0kb downstream 11908   true Chr10: 18282411-18294318 Sorghum bicolor
Sobic.010G132300 5.0kb downstream 5.0kb downstream 5000   false Chr10: 18289319-18294318 Sorghum bicolor
Sobic.010G132300 10.0kb upstream 10.0kb upstream 16908   true Chr10: 18272411-18289318 Sorghum bicolor
Sobic.010G132300 10.0kb upstream 10.0kb upstream 10000   false Chr10: 18272411-18282410 Sorghum bicolor
Sobic.010G132300 10.0kb downstream 10.0kb downstream 16908   true Chr10: 18282411-18299318 Sorghum bicolor
Sobic.010G132300 10.0kb downstream 10.0kb downstream 10000   false Chr10: 18289319-18299318 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189320 5267 Panicoideae View MSA
124575645 5269 Grass View MSA
122046505 5273 Angiosperm View MSA
121347618 5274 Embryophyte View MSA
123424733 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.762        
cufflinks 0.576       Low
cufflinks 1.62        
cufflinks 2.678        
cufflinks 4.057        
cufflinks 1.884        
cufflinks 2.493        
cufflinks 1.108       Low
cufflinks 3.822        
cufflinks 3.949        
cufflinks 2.947        
cufflinks 4.234        
cufflinks 3.013        
cufflinks 3.87        
cufflinks 2.6        
cufflinks 1.445       Low
cufflinks 2.59        
cufflinks 2.75        
cufflinks 1.522       Low
cufflinks 3.046        
cufflinks 4.266        
cufflinks 3.255        
cufflinks 3.855        
cufflinks 3.724        
cufflinks 1.116       Low
cufflinks 0.925       Low
cufflinks 3.814        
cufflinks 1.419       Low
cufflinks 2.304        
cufflinks 3.178        

0 Strain