Gene : Sobic.008G072900 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11945//PTHR11945:SF205 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  746
Name:  ? Sobic.008G072900 Secondary Identifier:  ? PAC:37926249
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G072900 0.5kb upstream 0.5kb upstream 6534   true Chr08: 10079524-10086057 Sorghum bicolor
Sobic.008G072900 0.5kb upstream 0.5kb upstream 500   false Chr08: 10079524-10080023 Sorghum bicolor
Sobic.008G072900 0.5kb downstream 0.5kb downstream 6534   true Chr08: 10080024-10086557 Sorghum bicolor
Sobic.008G072900 0.5kb downstream 0.5kb downstream 500   false Chr08: 10086058-10086557 Sorghum bicolor
Sobic.008G072900 1.0kb upstream 1.0kb upstream 7034   true Chr08: 10079024-10086057 Sorghum bicolor
Sobic.008G072900 1.0kb upstream 1.0kb upstream 1000   false Chr08: 10079024-10080023 Sorghum bicolor
Sobic.008G072900 1.0kb downstream 1.0kb downstream 7034   true Chr08: 10080024-10087057 Sorghum bicolor
Sobic.008G072900 1.0kb downstream 1.0kb downstream 1000   false Chr08: 10086058-10087057 Sorghum bicolor
Sobic.008G072900 2.0kb upstream 2.0kb upstream 8034   true Chr08: 10078024-10086057 Sorghum bicolor
Sobic.008G072900 2.0kb upstream 2.0kb upstream 2000   false Chr08: 10078024-10080023 Sorghum bicolor
Sobic.008G072900 2.0kb downstream 2.0kb downstream 8034   true Chr08: 10080024-10088057 Sorghum bicolor
Sobic.008G072900 2.0kb downstream 2.0kb downstream 2000   false Chr08: 10086058-10088057 Sorghum bicolor
Sobic.008G072900 5.0kb upstream 5.0kb upstream 11034   true Chr08: 10075024-10086057 Sorghum bicolor
Sobic.008G072900 5.0kb upstream 5.0kb upstream 5000   false Chr08: 10075024-10080023 Sorghum bicolor
Sobic.008G072900 5.0kb downstream 5.0kb downstream 11034   true Chr08: 10080024-10091057 Sorghum bicolor
Sobic.008G072900 5.0kb downstream 5.0kb downstream 5000   false Chr08: 10086058-10091057 Sorghum bicolor
Sobic.008G072900 10.0kb upstream 10.0kb upstream 16034   true Chr08: 10070024-10086057 Sorghum bicolor
Sobic.008G072900 10.0kb upstream 10.0kb upstream 10000   false Chr08: 10070024-10080023 Sorghum bicolor
Sobic.008G072900 10.0kb downstream 10.0kb downstream 16034   true Chr08: 10080024-10096057 Sorghum bicolor
Sobic.008G072900 10.0kb downstream 10.0kb downstream 10000   false Chr08: 10086058-10096057 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188595 5267 Panicoideae View MSA
124586411 5269 Grass View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.006     Low  
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.003     Low  
cufflinks 15.583     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.004     Low  
cufflinks 0.004     Low  
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.021     Low  
cufflinks 0.003     Low  
cufflinks 0.022     Low  
cufflinks 0.003     Low  
cufflinks 55.956     High High

0 Strain