Gene : Sobic.010G123400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10774//PTHR10774:SF90 - EXTENDED SYNAPTOTAGMIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1294
Name:  ? Sobic.010G123400 Secondary Identifier:  ? PAC:37909894
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G123400 0.5kb upstream 0.5kb upstream 7027   true Chr10: 14521067-14528093 Sorghum bicolor
Sobic.010G123400 0.5kb upstream 0.5kb upstream 500   false Chr10: 14521067-14521566 Sorghum bicolor
Sobic.010G123400 0.5kb downstream 0.5kb downstream 7027   true Chr10: 14521567-14528593 Sorghum bicolor
Sobic.010G123400 0.5kb downstream 0.5kb downstream 500   false Chr10: 14528094-14528593 Sorghum bicolor
Sobic.010G123400 1.0kb upstream 1.0kb upstream 7527   true Chr10: 14520567-14528093 Sorghum bicolor
Sobic.010G123400 1.0kb upstream 1.0kb upstream 1000   false Chr10: 14520567-14521566 Sorghum bicolor
Sobic.010G123400 1.0kb downstream 1.0kb downstream 7527   true Chr10: 14521567-14529093 Sorghum bicolor
Sobic.010G123400 1.0kb downstream 1.0kb downstream 1000   false Chr10: 14528094-14529093 Sorghum bicolor
Sobic.010G123400 2.0kb upstream 2.0kb upstream 8527   true Chr10: 14519567-14528093 Sorghum bicolor
Sobic.010G123400 2.0kb upstream 2.0kb upstream 2000   false Chr10: 14519567-14521566 Sorghum bicolor
Sobic.010G123400 2.0kb downstream 2.0kb downstream 8527   true Chr10: 14521567-14530093 Sorghum bicolor
Sobic.010G123400 2.0kb downstream 2.0kb downstream 2000   false Chr10: 14528094-14530093 Sorghum bicolor
Sobic.010G123400 5.0kb upstream 5.0kb upstream 11527   true Chr10: 14516567-14528093 Sorghum bicolor
Sobic.010G123400 5.0kb upstream 5.0kb upstream 5000   false Chr10: 14516567-14521566 Sorghum bicolor
Sobic.010G123400 5.0kb downstream 5.0kb downstream 11527   true Chr10: 14521567-14533093 Sorghum bicolor
Sobic.010G123400 5.0kb downstream 5.0kb downstream 5000   false Chr10: 14528094-14533093 Sorghum bicolor
Sobic.010G123400 10.0kb upstream 10.0kb upstream 16527   true Chr10: 14511567-14528093 Sorghum bicolor
Sobic.010G123400 10.0kb upstream 10.0kb upstream 10000   false Chr10: 14511567-14521566 Sorghum bicolor
Sobic.010G123400 10.0kb downstream 10.0kb downstream 16527   true Chr10: 14521567-14538093 Sorghum bicolor
Sobic.010G123400 10.0kb downstream 10.0kb downstream 10000   false Chr10: 14528094-14538093 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182350 5267 Panicoideae View MSA
124573452 5269 Grass View MSA
122044186 5273 Angiosperm View MSA
121350183 5274 Embryophyte View MSA
123381609 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.063       Low
cufflinks 1.525       Low
cufflinks 11.089     High High
cufflinks 12.595     High High
cufflinks 1.931        
cufflinks 2.69        
cufflinks 2.394        
cufflinks 2.3        
cufflinks 3.978        
cufflinks 3.351        
cufflinks 5.42       High
cufflinks 5.355       High
cufflinks 3.191        
cufflinks 4.564        
cufflinks 2.037        
cufflinks 2.7        
cufflinks 2.474        
cufflinks 2.206        
cufflinks 3.621        
cufflinks 2.998        
cufflinks 2.115        
cufflinks 2.14        
cufflinks 4.371        
cufflinks 3.738        
cufflinks 5.388       High
cufflinks 1.964        
cufflinks 7.434       High
cufflinks 0.513       Low
cufflinks 1.146       Low
cufflinks 2.601        

0 Strain