Gene : Sobic.008G087200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22891:SF35 - PROTEIN ARGONAUTE 6 Genomic Order:  895
Name:  ? Sobic.008G087200 Secondary Identifier:  ? PAC:37926417
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G087200 0.5kb upstream 0.5kb upstream 9003   true Chr08: 17969337-17978339 Sorghum bicolor
Sobic.008G087200 0.5kb upstream 0.5kb upstream 500   false Chr08: 17969337-17969836 Sorghum bicolor
Sobic.008G087200 0.5kb downstream 0.5kb downstream 9003   true Chr08: 17969837-17978839 Sorghum bicolor
Sobic.008G087200 0.5kb downstream 0.5kb downstream 500   false Chr08: 17978340-17978839 Sorghum bicolor
Sobic.008G087200 1.0kb upstream 1.0kb upstream 9503   true Chr08: 17968837-17978339 Sorghum bicolor
Sobic.008G087200 1.0kb upstream 1.0kb upstream 1000   false Chr08: 17968837-17969836 Sorghum bicolor
Sobic.008G087200 1.0kb downstream 1.0kb downstream 9503   true Chr08: 17969837-17979339 Sorghum bicolor
Sobic.008G087200 1.0kb downstream 1.0kb downstream 1000   false Chr08: 17978340-17979339 Sorghum bicolor
Sobic.008G087200 2.0kb upstream 2.0kb upstream 10503   true Chr08: 17967837-17978339 Sorghum bicolor
Sobic.008G087200 2.0kb upstream 2.0kb upstream 2000   false Chr08: 17967837-17969836 Sorghum bicolor
Sobic.008G087200 2.0kb downstream 2.0kb downstream 10503   true Chr08: 17969837-17980339 Sorghum bicolor
Sobic.008G087200 2.0kb downstream 2.0kb downstream 2000   false Chr08: 17978340-17980339 Sorghum bicolor
Sobic.008G087200 5.0kb upstream 5.0kb upstream 13503   true Chr08: 17964837-17978339 Sorghum bicolor
Sobic.008G087200 5.0kb upstream 5.0kb upstream 5000   false Chr08: 17964837-17969836 Sorghum bicolor
Sobic.008G087200 5.0kb downstream 5.0kb downstream 13503   true Chr08: 17969837-17983339 Sorghum bicolor
Sobic.008G087200 5.0kb downstream 5.0kb downstream 5000   false Chr08: 17978340-17983339 Sorghum bicolor
Sobic.008G087200 10.0kb upstream 10.0kb upstream 18503   true Chr08: 17959837-17978339 Sorghum bicolor
Sobic.008G087200 10.0kb upstream 10.0kb upstream 10000   false Chr08: 17959837-17969836 Sorghum bicolor
Sobic.008G087200 10.0kb downstream 10.0kb downstream 18503   true Chr08: 17969837-17988339 Sorghum bicolor
Sobic.008G087200 10.0kb downstream 10.0kb downstream 10000   false Chr08: 17978340-17988339 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027856 5273 Angiosperm View MSA
122184790 5267 Panicoideae View MSA
124585390 5269 Grass View MSA
121349761 5274 Embryophyte View MSA
123381432 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.122       Low
cufflinks 0.167       Low
cufflinks 1.099        
cufflinks 0.883        
cufflinks 6.26       High
cufflinks 1.028        
cufflinks 1.816        
cufflinks 0.612        
cufflinks 1.589        
cufflinks 1.809        
cufflinks 1.059        
cufflinks 1.155        
cufflinks 1.563        
cufflinks 0.802        
cufflinks 1.814        
cufflinks 0.444        
cufflinks 1.747        
cufflinks 1.819        
cufflinks 0.465        
cufflinks 2.066        
cufflinks 9.801       High
cufflinks 1.164        
cufflinks 1.203        
cufflinks 1.294        
cufflinks 0.275       Low
cufflinks 0.251       Low
cufflinks 0.735        
cufflinks 0.153       Low
cufflinks 0.706        
cufflinks 2.492        

0 Strain