Gene : Sobic.010G121500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12663:SF0 - PDS5 Genomic Order:  1277
Name:  ? Sobic.010G121500 Secondary Identifier:  ? PAC:37910598
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G121500 0.5kb upstream 0.5kb upstream 15340   true Chr10: 14123135-14138474 Sorghum bicolor
Sobic.010G121500 0.5kb upstream 0.5kb upstream 500   false Chr10: 14123135-14123634 Sorghum bicolor
Sobic.010G121500 0.5kb downstream 0.5kb downstream 15340   true Chr10: 14123635-14138974 Sorghum bicolor
Sobic.010G121500 0.5kb downstream 0.5kb downstream 500   false Chr10: 14138475-14138974 Sorghum bicolor
Sobic.010G121500 1.0kb upstream 1.0kb upstream 15840   true Chr10: 14122635-14138474 Sorghum bicolor
Sobic.010G121500 1.0kb upstream 1.0kb upstream 1000   false Chr10: 14122635-14123634 Sorghum bicolor
Sobic.010G121500 1.0kb downstream 1.0kb downstream 15840   true Chr10: 14123635-14139474 Sorghum bicolor
Sobic.010G121500 1.0kb downstream 1.0kb downstream 1000   false Chr10: 14138475-14139474 Sorghum bicolor
Sobic.010G121500 2.0kb upstream 2.0kb upstream 16840   true Chr10: 14121635-14138474 Sorghum bicolor
Sobic.010G121500 2.0kb upstream 2.0kb upstream 2000   false Chr10: 14121635-14123634 Sorghum bicolor
Sobic.010G121500 2.0kb downstream 2.0kb downstream 16840   true Chr10: 14123635-14140474 Sorghum bicolor
Sobic.010G121500 2.0kb downstream 2.0kb downstream 2000   false Chr10: 14138475-14140474 Sorghum bicolor
Sobic.010G121500 5.0kb upstream 5.0kb upstream 19840   true Chr10: 14118635-14138474 Sorghum bicolor
Sobic.010G121500 5.0kb upstream 5.0kb upstream 5000   false Chr10: 14118635-14123634 Sorghum bicolor
Sobic.010G121500 5.0kb downstream 5.0kb downstream 19840   true Chr10: 14123635-14143474 Sorghum bicolor
Sobic.010G121500 5.0kb downstream 5.0kb downstream 5000   false Chr10: 14138475-14143474 Sorghum bicolor
Sobic.010G121500 10.0kb upstream 10.0kb upstream 24840   true Chr10: 14113635-14138474 Sorghum bicolor
Sobic.010G121500 10.0kb upstream 10.0kb upstream 10000   false Chr10: 14113635-14123634 Sorghum bicolor
Sobic.010G121500 10.0kb downstream 10.0kb downstream 24840   true Chr10: 14123635-14148474 Sorghum bicolor
Sobic.010G121500 10.0kb downstream 10.0kb downstream 10000   false Chr10: 14138475-14148474 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182314 5267 Panicoideae View MSA
124577653 5269 Grass View MSA
122045093 5273 Angiosperm View MSA
121348998 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.765       Low
cufflinks 4.623       Low
cufflinks 9.063        
cufflinks 9.407        
cufflinks 12.358        
cufflinks 6.077        
cufflinks 10.072        
cufflinks 4.951       Low
cufflinks 8.309        
cufflinks 6.889        
cufflinks 10.564        
cufflinks 12.702     High High
cufflinks 6.028        
cufflinks 8.833        
cufflinks 10.075        
cufflinks 7.225        
cufflinks 9.457        
cufflinks 10.09        
cufflinks 8.665        
cufflinks 10.004        
cufflinks 15.096     High High
cufflinks 8.865        
cufflinks 10.226        
cufflinks 9.482        
cufflinks 8.557     High  
cufflinks 5.245        
cufflinks 8.093        
cufflinks 1.915       Low
cufflinks 7.436        
cufflinks 12.558     High High

0 Strain