Gene : Sobic.008G088821 S. bicolor v3.1.1
Defline:  (1 of 2) K05356 - all-trans-nonaprenyl-diphosphate synthase (SPS, sds) Genomic Order:  918
Name:  ? Sobic.008G088821 Secondary Identifier:  ? PAC:37926324
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-5805 Sorghum bicolor pathologic  

Genomics

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Expression

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G088821 0.5kb upstream 0.5kb upstream 15589   true Chr08: 20337572-20353160 Sorghum bicolor
Sobic.008G088821 0.5kb upstream 0.5kb upstream 500   false Chr08: 20337572-20338071 Sorghum bicolor
Sobic.008G088821 0.5kb downstream 0.5kb downstream 15589   true Chr08: 20338072-20353660 Sorghum bicolor
Sobic.008G088821 0.5kb downstream 0.5kb downstream 500   false Chr08: 20353161-20353660 Sorghum bicolor
Sobic.008G088821 1.0kb upstream 1.0kb upstream 16089   true Chr08: 20337072-20353160 Sorghum bicolor
Sobic.008G088821 1.0kb upstream 1.0kb upstream 1000   false Chr08: 20337072-20338071 Sorghum bicolor
Sobic.008G088821 1.0kb downstream 1.0kb downstream 16089   true Chr08: 20338072-20354160 Sorghum bicolor
Sobic.008G088821 1.0kb downstream 1.0kb downstream 1000   false Chr08: 20353161-20354160 Sorghum bicolor
Sobic.008G088821 2.0kb upstream 2.0kb upstream 17089   true Chr08: 20336072-20353160 Sorghum bicolor
Sobic.008G088821 2.0kb upstream 2.0kb upstream 2000   false Chr08: 20336072-20338071 Sorghum bicolor
Sobic.008G088821 2.0kb downstream 2.0kb downstream 17089   true Chr08: 20338072-20355160 Sorghum bicolor
Sobic.008G088821 2.0kb downstream 2.0kb downstream 2000   false Chr08: 20353161-20355160 Sorghum bicolor
Sobic.008G088821 5.0kb upstream 5.0kb upstream 20089   true Chr08: 20333072-20353160 Sorghum bicolor
Sobic.008G088821 5.0kb upstream 5.0kb upstream 5000   false Chr08: 20333072-20338071 Sorghum bicolor
Sobic.008G088821 5.0kb downstream 5.0kb downstream 20089   true Chr08: 20338072-20358160 Sorghum bicolor
Sobic.008G088821 5.0kb downstream 5.0kb downstream 5000   false Chr08: 20353161-20358160 Sorghum bicolor
Sobic.008G088821 10.0kb upstream 10.0kb upstream 25089   true Chr08: 20328072-20353160 Sorghum bicolor
Sobic.008G088821 10.0kb upstream 10.0kb upstream 10000   false Chr08: 20328072-20338071 Sorghum bicolor
Sobic.008G088821 10.0kb downstream 10.0kb downstream 25089   true Chr08: 20338072-20363160 Sorghum bicolor
Sobic.008G088821 10.0kb downstream 10.0kb downstream 10000   false Chr08: 20353161-20363160 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041065 5273 Angiosperm View MSA
122182830 5267 Panicoideae View MSA
124570565 5269 Grass View MSA
121345449 5274 Embryophyte View MSA
123424009 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low  
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain